2023 Lecture Outlines

Each link below contains an outline of the material covered in each lecture and pdf copies of any handouts. These will appear every day right after the lecture.

There were some topics not covered in 421 that will be a large part of 422. To help with that, here are the slides from previous lectures in 421 that you might want to look through. Here is the lecture from Dr. Tolan on Vitamins & Coenzymes, with links to the recordings of this lectures:

Echo360 for the Vitamin lecture from Fall421-A1 video (it includes some of carbohydrates).


In case you are wanting to brush up on your carbohydrates from BI 421, please review these slides.

Lecture 1 Outline (Fri; 1/20/2023)

Here is a print out of the slides giving an overview and introduction to metabolism.

Lecture 2 Outline (Mon; 1/23/2023)

Here is a print out of the slides on ATP cycle, Energy coupling, and Orgo review.

Lecture 3 Outline (Wed; 1/25/2023)

Here is a print out of the slides on Orgo and re-dox review.

Lecture 4 Outline (Fri; 1/27/2023)

Here is a print out of the slides on Membrane Transport.

Lecture 5 Outline (Mon; 1/30/2023)

Here is a print out of the slides on Membrane Active Transport and Introduction to Carbohydrate Catabolism.

Lecture 6 Outline (Wed; 2/1/2023)

Here is a print out of the slides on Glycolysis I.

Lecture 7 Outline (Fri; 2/3/2023)

Here is a print out of the slides on Glycolysis II.

Lecture 8 Outline (Mon; 2/6/2023)

Here is a print out of the slides on Carbohydrate Catabolism: Other sugars and Fermentation I.

End of material for Exam 1 in BI/CH 422-622

EXAM 1 (Wed 7 PM, MORSE; 2/8/2023)

Lecture 9 Outline (Fri; 2/10/2023)

Here is a print out of the slides on Fermentation II and Pyruvate Oxidation I.

Lecture 10 Outline (Mon; 2/13/2023)

Here is a print out of the slides on Pyruvate Oxidation II and TCA Cycle I.

Lecture 11 Outline (Wed; 2/15/2023)

Here is a print out of the slides on TCA Cycle II. Also, here is a link to a powerpoint file
with 5 slides on the discovery of the Kreb's Cycle, including the video of Dr. Kornberg describing the discovery.

Lecture 12 Outline (Fri; 2/17/2023)

Here is a print out of the slides on TCA Cycle III.

Lecture 13 Outline (Tue; 2/21/2023)

Here is a print out of the slides on Oxidative Phosphorylation I; electron transport

Lecture 14 Outline (Wed; 2/22/2023)

Here is a print out of the slides on Oxidative Phosphorylation II; electron transport complexes.

Lecture 15 Outline (Fri; 2/24/2023)

Here is a print out of the slides on Oxidative Phosphorylation III; electron transport and ATP synthesis.

Lecture 16 Outline (Mon; 2/27/2023)

Here is a print out of the slides on Oxidative Phosphorylation IV; ATP synthesis.

End of material for Exam 2 in BI/CH 422-622

EXAM II (Wed 7 PM, LAW; 3/1/2023)

Lecture 17 Outline (Wed; 3/1/2023)

Here is a print out of the slides on Lipid Catabolism I.

Lecture 18 Outline (Fri; 3/3/2023)

Here is a print out of the slides on Lipid Catabolism II; beta-oxidation.

HAVE A GREAT SPRING BREAK!!

Lecture 19 Outline (Mon; 3/13/2023)

Here is a print out of the slides on Lipid Catabolism III: ketone bodies, etc.
and Protein Catabolism I: protein digestion and turnover.

Lecture 20 Outline (Wed; 3/15/2023)

Here is a print out of the slides on Protein Catabolism II: turnover by ubiquitination and proteosome, and dealing with nitrogen I.

Lecture 21 Outline (Fri; 3/17/2023)

Here is a print out of the slides on Protein Catabolism III: dealing with nitrogen II; the Urea Cycle.

Lecture 22 Outline (Mon; 3/20/2023)

Here is a print out of the slides on Protein Catabolism IV: Amino-acid oxidation (TA, Glu, Pyr
families & One-carbon metabolism). Plus PLP versatility

Lecture 23 Outline (Wed; 3/22/2023)

Here is a print out of the slides on Protein Catabolism V: Amino-acid oxidation (alpha-keotbutyrate, aromatic,
and alpha-ketoadipate families (One-carbon metabolism, and oxygenases).

Lecture 24 Outline (Fri; 3/24/2023)

Here is a print out of the slides on Protein Catabolism VI: Amino-acid oxidation (branched-chain
families (oxidative dehydrogenases (PDH, αKGDH, BCAADH); propionyl-CoA; and introduction to Nucleic Acid Degradation.

Lecture 25b Outline (Mon; 3/27/2023)

Here is a print out of the slides on Protein Catabolism VII: Nucleic Acid Degradation.
End of material for Exam 3 in BI/CH 422-622

EXAM III (Wed 7 PM, CGS-129; 3/29/2023)

Lecture 25b Outline (Mon; 3/27/2023)

Here is a print out of the slides on ANABOLISM I: PHOTOSYNTHESIS

Lecture 26 Outline (Fri; 3/31/2023)

Here is a print out of the slides on Photosynthesis I:
Early experiments, PS-II, PQH2, PSI.

Lecture 27 Outline (Mon; 4/3/2023)

Here is a print out of the slides on Photosynthesis II:
Light reactions, ATP, and Introduction to Calvin Cycle (RUBISCO mechanism).

Lecture 28 Outline (Wed; 4/5/2023)

Here is a print out of the slides on Photosynthesis III: Calvin Cycle (RUBISCO, stage2, stage3),
Regulation, C3 vs C4, Kornberg Cycle.

Lecture 29 Outline (Fri; 4/7/2023)

Here is a print out of the slides on Carbohydrate Anabolism I: Gluconeogenesis and Glycogen Synthesis.

Lecture 30 Outline (Mon; 4/10/2023)

Here is a print out of the slides on Carbohydrate Anabolism I: Pentose-phosphate pathway, Intro to Regulation.

Lecture 31 Outline (Wed; 4/12/2023)

Here is a print out of the slides on Carbohydrate Anabolism I: Regulation.

Lecture 32 Outline (Fri; 4/14/2023)

Here is a print out of the slides on Carbohydrate Anabolism I: Regulation and Anaplerosis.
End of material for Exam 4 in BI/CH 422-622

EXAM IV (Wed 7 PM, CGS-129; 4/26/2023)

Lecture 33 Outline (Wed (Mon Schedule); 4/19/2023)

Remember the first slides on "Lipid Biosynthesis: Introduction" are at the end of this file.

Here is a print out of the slides on Anabolism II: Lipid Biosynthesis I: Fatty Acid Synthesis and Diversification.

Lecture 34 Outline (Fri; 4/21/2023)

Here is a print out of the slides on Anabolism II: Lipid Biosynthesis II: Prostaglandins,
Fat, Membrane Lipids, Ketone Bodies.

Lecture 35 Outline (Mon; 4/24/2023)

Here is a print out of the slides on Anabolism II: Lipid Biosynthesis III: Isoprenes & Cholesterol.

Lecture 36 Outline (Wed; 4/26/2023)

Here is a print out of the slides on Anabolism II: Lipid Biosynthesis IV: Control of Cholesterol Metabolism and
Anabolism III: Nitrogen Metabolism I: Nitrogen fixation.

Lecture 37 Outline (Fri; 4/28/2023)

Here is a print out of the slides on Anabolism III: Nitrogen Metabolism II: Nitrogen Assimilation
and Amino Acid Biosynthesis.

Lecture 38 Outline (Mon; 5/1/2023)

Here is a print out of the slides on Anabolism III: Nitrogen Metabolism III: Essential Amino Acid Biosynthesis
and Nucleotide Biosynthesis.

Lecture 39 Outline (Wed; 5/3/2023)

Here is a print out of the slides on Anabolism III: Nitrogen Metabolism IV: deoxy-nucleotides,
dTTP, Regulation, Porphyrin Metabolism.

End of material for Exam 5 in BI/CH 422-622

EXAM 5 (Wed 9 AM, LAW; 5/10/2023)

(Remember that a portion of Exam 5 will have questions listed here from previous exams)