{"id":56,"date":"2011-09-28T13:53:58","date_gmt":"2011-09-28T17:53:58","guid":{"rendered":"https:\/\/www.bu.edu\/sscores\/?page_id=56"},"modified":"2014-09-25T10:05:44","modified_gmt":"2014-09-25T14:05:44","slug":"proteomics","status":"publish","type":"page","link":"https:\/\/www.bu.edu\/sscores\/cores\/proteomics\/","title":{"rendered":"Proteomics Core"},"content":{"rendered":"<h4><em>The mission of the Proteomics Core is to provide serum proteomic analysis at reduced cost to investigators studying systemic sclerosis. \u00a0The goal of the Proteomics Core is to define a core set of clinically useful biomarkers for research and patient care.<\/em><\/h4>\n<h3><span style=\"font-size: 1.17em;\">PI &#8211; John Varga, MD; Monique Hinchcliff, MD, MS<\/span><\/h3>\n<table border=\"0\">\n<tbody>\n<tr>\n<td><strong>Contact<\/strong><\/td>\n<td><\/td>\n<td><\/td>\n<\/tr>\n<tr>\n<td>Mary Carns<\/td>\n<td>312.503.1137<\/td>\n<td><a href=\"mailto:m-carns@northwestern.edu\">m-carns@northwestern.edu<\/a><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<p><strong>Description: <\/strong>The Proteomics Core offers high quality multiplexed assay analyses to facilitate the discovery of important proteins related to scleroderma. These analyses may lead to insights into the pathogenesis, progression, and response to treatment of scleroderma.<\/p>\n<p><strong>Benefit to You:<\/strong> Investigators will have access to commercially available products at a 75% reduced cost. Additionally, associations with clinical data entered into the Clinical Core will be facilitated.<\/p>\n<p><strong><a href=\"\/sscores\/files\/2011\/09\/Serum_processing_2.jpg\"><img loading=\"lazy\" class=\"alignleft size-thumbnail wp-image-422\" title=\"Serum_processing_2\" src=\"\/sscores\/files\/2011\/09\/Serum_processing_2-150x150.jpg\" alt=\"Serum_processing_2\" width=\"150\" height=\"150\" \/><\/a>Procedure: <\/strong>Investigators will submit a small volume (500 \u03bcL) of frozen scleroderma sera to the Proteomics Core. Samples will be batched, barcoded, and sent to Rules Based Medicine, a biotechnology company specializing in proprietary protein-based products and services across the life sciences spectrum since 1999. Samples will be run on the DiscoveryMAP\u00ae v1.0, which includes over 100 analytes measuring markers of infectious disease, autoimmunity, cardiovascular risk, cancer, hormones, cytokines\/chemokines, acute phase reactants, clotting proteins, growth factors, and tissue modeling factors (see below for complete list of analytes). To further reduce costs, an SSc Biomarker panel is being developed and validated in a discovery cohort. Once available, this panel will examine a core set of ~20 analytes showing statistical significance compared to controls. Bioinformatics analyses of proteomic data and corresponding data in the Clinical and Microarray Cores will also be available.<\/p>\n<h3><strong>Ready to participate?<\/strong> <a href=\"https:\/\/www.bu.edu\/sscores\/cores\/proteomics\/proteomic-core-submission-guidelines\/\">Follow these guidelines<\/a> to process and ship samples.<\/h3>\n<h3><img loading=\"lazy\" class=\"alignnone size-medium wp-image-197\" title=\"Myriad RBM\" src=\"\/sscores\/files\/2011\/09\/Myriad-RBM1-636x421.jpg\" alt=\"Myriad RBM\" width=\"636\" height=\"421\" srcset=\"https:\/\/www.bu.edu\/sscores\/files\/2011\/09\/Myriad-RBM1-636x421.jpg 636w, https:\/\/www.bu.edu\/sscores\/files\/2011\/09\/Myriad-RBM1.jpg 944w\" sizes=\"(max-width: 636px) 100vw, 636px\" \/><\/h3>\n<p>Click here to view the\u00a0<a href=\"\/sscores\/files\/2011\/09\/DiscoveryMAP-250+-8-8-12.pdf\">DiscoveryMAP 250+ <\/a> Analytes<\/p>\n","protected":false},"excerpt":{"rendered":"<p>The mission of the Proteomics Core is to provide serum proteomic analysis at reduced cost to investigators studying systemic sclerosis. \u00a0The goal of the Proteomics Core is to define a core set of clinically useful biomarkers for research and patient care. PI &#8211; John Varga, MD; Monique Hinchcliff, MD, MS Contact Mary Carns 312.503.1137 m-carns@northwestern.edu [&hellip;]<\/p>\n","protected":false},"author":4558,"featured_media":0,"parent":12,"menu_order":4,"comment_status":"closed","ping_status":"closed","template":"","meta":[],"_links":{"self":[{"href":"https:\/\/www.bu.edu\/sscores\/wp-json\/wp\/v2\/pages\/56"}],"collection":[{"href":"https:\/\/www.bu.edu\/sscores\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.bu.edu\/sscores\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.bu.edu\/sscores\/wp-json\/wp\/v2\/users\/4558"}],"replies":[{"embeddable":true,"href":"https:\/\/www.bu.edu\/sscores\/wp-json\/wp\/v2\/comments?post=56"}],"version-history":[{"count":50,"href":"https:\/\/www.bu.edu\/sscores\/wp-json\/wp\/v2\/pages\/56\/revisions"}],"predecessor-version":[{"id":569,"href":"https:\/\/www.bu.edu\/sscores\/wp-json\/wp\/v2\/pages\/56\/revisions\/569"}],"up":[{"embeddable":true,"href":"https:\/\/www.bu.edu\/sscores\/wp-json\/wp\/v2\/pages\/12"}],"wp:attachment":[{"href":"https:\/\/www.bu.edu\/sscores\/wp-json\/wp\/v2\/media?parent=56"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}