{"id":61237,"date":"2025-12-02T12:42:45","date_gmt":"2025-12-02T17:42:45","guid":{"rendered":"https:\/\/www.bu.edu\/research\/?page_id=61237"},"modified":"2026-01-23T13:43:34","modified_gmt":"2026-01-23T18:43:34","slug":"rodent-breeding","status":"publish","type":"page","link":"https:\/\/www.bu.edu\/research\/ethics-compliance\/animal-subjects\/animal-care\/breeding\/rodent-breeding\/","title":{"rendered":"Rodent Breeding"},"content":{"rendered":"<p>Boston University is committed to observing federal policies and regulations and AAALAC international standards and guidelines for the humane care and use of animals.<\/p>\n<p>Mice and Rats have short gestation times and large litters. Therefore, cages may become overcrowded quickly if the individual responsible for managing the breeding colony and separating animals at the proper times does not do so in a timely fashion.<\/p>\n<p>When overcrowding of cages happens, the animals may become stressed and pups can die from being trampled. In static micro barrier cages, the air quality quickly deteriorates with a high density of animals and may predispose them to respiratory disease. Overcrowding of cages is an animal welfare concern and can have a deleterious effect on research.<\/p>\n<p>This policy provides guidelines for mouse and rat breeding colonies and defines standards and responsibilities for housing and breeding cages. This policy assigns responsibility for action when mouse and rat breeding cages are overcrowded. This policy also establishes when newborn rodents are to be counted for protocol tracking and regulatory compliance purposes. &nbsp;Adherence to this policy is mandatory unless a specific exception has been approved by the IACUC.<\/p>\n<h2 id=\"responsibilities\">Responsibilities<\/h2>\n<h3 id=\"investigators\">Investigators<\/h3>\n<p>Investigators are responsible for:<\/p>\n<ol>\n<li>Coordinating with Boston University Animal Science Center (BU ASC) for space allocation of their mouse and rat breeding colonies.<\/li>\n<li>Managing their own breeding colonies unless arrangements for technical support have been made with BU ASC.<\/li>\n<li>Designating a colony manager (someone who has received specific training on managing mouse breeding colonies, and who will be the primary contact person for the lab). More than one colony manager may be designated by the PI, but it is preferable that this number be minimized to facilitate communication between the BU ASC and the rodent users.<\/li>\n<\/ol>\n<h3 id=\"colony-manager\">Colony Manager<\/h3>\n<p>The designated colony manager (research staff or BU ASC staff) is responsible for separating animals according to allowed cage space as described in the Breeding Schemes, Weaning Pups, and Numbers of Rodents Per Cage sections, below.<\/p>\n<h3 id=\"bu-asc-staff-and-investigators\">BU ASC Staff and Investigators<\/h3>\n<p>Both the BU ASC staff, and investigators managing their own rodent breeding colonies, must abide by procedures as outlined in this policy.<\/p>\n<p>Any recurring problems with rodent breeding colony management will be brought to the attention of the IACUC.<\/p>\n<h2 id=\"breeding-schemes-and-procedures\">Breeding Schemes and Procedures<\/h2>\n<p>Two different breeding schemes are generally acceptable. In either, the designated colony manager (research staff or BU ASC staff) is responsible for carefully monitoring pregnancies.<\/p>\n<h3 id=\"a-monogamous-pairs\">A. Monogamous Pairs<\/h3>\n<p>Postpartum estrus occurs within 24 hours of parturition: If the male is left in the cage, the female is likely to become pregnant again while lactating and nursing the new litter.<\/p>\n<h4>For Mice<\/h4>\n<p>One male (only one male per cage is allowed) and one female are housed together for mating. Nesting material is provided in the cage. The mice need not be separated when the female becomes pregnant or delivers the pups. This model takes advantage of postpartum estrus and allows the female to become pregnant and nurse at the same time. Litters are born approximately 21 days apart. The three-week-old litter must be weaned prior to the birth of the new litter as the presence of two litters may cause stress to the dam and may result in suboptimal care or cannibalism of the new pups.<\/p>\n<h4>For Rats<\/h4>\n<p>Nesting material is provided to the cage. The male may be removed either before the litter is born when the female is noticeably pregnant or at the first cage change after parturition to make more space for the pups. The second method allows for the use of post-partum estrus, as does leaving the male in the cage.<\/p>\n<h3 id=\"b-harem-mating\">B. Harem Mating<\/h3>\n<p>This method houses two females in a cage with one male (only one male per cage is allowed). For mice, three females may be allowed in some circumstances. During routine health\/breeding checks, each noticeably pregnant female is removed and placed in her own individual cage. When the pregnant female is separated from the harem cage, she is given nesting material in her delivery cage to make a nest for her pups. The female delivers her pups and nurses them for 21 days, or up to 28 days with IACUC or veterinary approval, following the procedure below in Weaning Pups. Only one nursing female and litter is allowed per cage. After the pups are weaned, the female may be returned to a harem cage.<\/p>\n<h3 id=\"c-checking-pregnancy-and-birth\">C. Checking Pregnancy and Birth<\/h3>\n<p>The Designated Colony Manager has primary responsibility for checking for pregnancy and birth and for recording these events on the cage card(s). When the litter is born, the cage is flagged with a New Litter Card and the date of birth (DOB) and projected weaning date is documented. However, if BU ASC staff find births of litters when checking and changing cages, they will place a New Litter Card and the DOB.<\/p>\n<h3 id=\"d-after-birth\">D. After Birth<\/h3>\n<p>After pups are born, the cage is left undisturbed for at leas t5 days except for replenishing of food and water as needed. If the bedding gets very dirty or wet, and the cage must be changed sooner, the following procedure will be followed:<\/p>\n<ul>\n<li>The female is transferred first<\/li>\n<li>Then the litter, plus a small amount of the dirty bedding and nest (so the smell in the clean cage will be familiar) is scooped up altogether with a gloved hand and transferred to the new cage.<\/li>\n<li>The same procedure is followed until the pups start moving around the entire cage.<\/li>\n<\/ul>\n<h2 id=\"required-documentation-and-cage-cards\">Required Documentation and Cage Cards<\/h2>\n<h3 id=\"breeding-card-required-information\">Breeding Card Required Information<\/h3>\n<ul>\n<li>Principal investigator (name)<\/li>\n<li>IACUC protocol (ID #)<\/li>\n<li>User\/colony manager<\/li>\n<li>Contact information<\/li>\n<li>Litters born and DOB<\/li>\n<\/ul>\n<h3 id=\"new-litter-card-required-information\">New Litter Card Required Information<\/h3>\n<p>So that the card is visible, place it vertically behind the Cage Card<\/p>\n<ul>\n<li>Date of birth (DOB)<\/li>\n<li>Projected weaning date of new litter<\/li>\n<\/ul>\n<h2 id=\"weaning-pups\">Weaning Pups<\/h2>\n<h3 id=\"a-age-of-pups-at-weaning\">A. Age of Pups at Weaning<\/h3>\n<p>The weaning age for mouse and rat pups is routinely 21 days of age. In the case of some inbred, genetically modified, or mutant strains, it may be advantageous to allow the pups to remain with the female for 28 days.<\/p>\n<ol>\n<li>To extend nursing time past the 21-day standard, BU ASC must be notified by placing a note on the New Litter Card. The colony manager must communicate via email to <a href=\"mailto:buasc@bu.edu\">BUASC@bu.edu<\/a> or <a href=\"mailto:LACF-list@bu.edu\">LACF-list@bu.edu<\/a> when all pups in a given breeding line will be routinely weaned at 28 days. This must be approved in the IACUC protocol to be implemented. If there is a veterinary concern with small pups, extended wean may be approved by a veterinarian in individual cases to better support those animals.<\/li>\n<li>Allowing a three-week-old litter to stay in the cage with a lactating female that also has a newborn litter is not permitted unless the older litter is not big enough to be weaned. In those cases, ASC will discuss options with the investigator\u2019s lab. In some cases, one or two runted pups from the older litter may be able to stay while they need the extra support when the rest of the litter is weaned and separated.<\/li>\n<\/ol>\n<h3 id=\"b-monogamous-pairs\">B. Monogamous Pairs<\/h3>\n<p>Assuming the lactating mother is pregnant, pups are weaned at 20\u201321 days of age, just before the new litter is born. This will prevent trampling of newborn pups by the weanling pups, and prevent the cage from being overcrowded.<\/p>\n<h3 id=\"c-harem-mated-females\">C. Harem-Mated Females<\/h3>\n<ol>\n<li>If a singly-housed lactating female is alone in a cage with her litter, weaning is less urgent than with monogamous pairs. However, mouse pups are routinely weaned at 21 days of age unless an exception has been approved by the IACUC or BU ASC.<\/li>\n<li>For mice: If two females raise their pups together in one cage, a procedure which must be pre-approved by BU ASC, attention must be paid as the pups grow older so that the cage does not become overcrowded. Each female with litter must be singly housed no later than two weeks after birth of pups unless approved for a different scheme in the IACUC protocol.<\/li>\n<\/ol>\n<h3 id=\"d-separation-of-sexes-at-weaning\">D. Separation of Sexes at Weaning<\/h3>\n<ol>\n<li>Male and female pups are separated at weaning, with mice of each sex being placed in a separate cage.<\/li>\n<li>If a litter contains only one pup of a given sex, provisions must be made to house this pup with others of the same sex at weaning. Newly weaned pups must not be housed singly. Possible housing options include:\n<ul>\n<li>A single female pup may remain with the mother.<\/li>\n<li>A single male pup may be placed with other male pups from a different litter of the same age.<\/li>\n<li>If the parents are a monogamous pair, a single male pup may be housed with the father, both being separated out into a new cage.<\/li>\n<li>A single male pup may be housed with female siblings up to six weeks of age (adulthood).<\/li>\n<li>More than one male pup may NOT be housed with female siblings.<\/li>\n<li>It is recommended that sexing of the pups be verified one week later.<\/li>\n<li>If no suitable cagemates are available, the individually housed animal will be given additional enrichment.<\/li>\n<\/ul>\n<\/li>\n<\/ol>\n<h2 id=\"number-of-mice-per-cage\">Number of Mice Per Cage<\/h2>\n<p>Cage sizes vary in the different facilities; the colony manager is encouraged to ask BU ASC staff about the size of the cages in which their mice are housed or refer to the cage occupancy guidance on the Office of Research website under \u201c<a href=\"https:\/\/www.bu.edu\/research\/ethics-compliance\/animal-subjects\/housing\/asc-rodent-housing-policy\/\">Rodent Housing Policy<\/a>\u201d.<\/p>\n<h3 id=\"a-all-mouse-cages\">A. All Mouse Cages<\/h3>\n<ol>\n<li>Unless mice are weighed weekly to confirm that the actual weight is 25g or less, mice are classified as adults at 6 weeks of age and older.<\/li>\n<li>When mice are weaned, they are weaned to adult specifications to avoid needing to separate them and re-house them in 2\u20133 weeks.<\/li>\n<li>Five adult female or male mice or one lactating female with nursing litter are allowed per standard cage.<\/li>\n<li>One adult male and one adult female with or without nursing litter (monogamous pair).<\/li>\n<li>Occasionally when females have small litters, or do not lactate well, it may be beneficial to house two lactating females together in one 60- or 75-square-inch cage so they can raise their litters cooperatively. This must be pre-approved by BU ASC, noted on the Cage Card, and communicated to <a href=\"mailto:buasc@bu.edu\">BUASC@bu.edu<\/a> or <a href=\"mailto:LACF-list@bu.edu\">LACF-list@bu.edu<\/a>. This must be reflected and approved in the IACUC protocol to be approved by ASC. If there is a veterinary concern with small pups, extended wean may be approved by a veterinarian in individual cases to better support those animals.<\/li>\n<li>One adult male and two or maximum three adult females without litters (harem cage).<\/li>\n<\/ol>\n<h2 id=\"number-of-rats-per-cage\">Number of Rats Per Cage<\/h2>\n<p>Rats are social animals and because male rats rarely fight\u2014with the notable exception of retired breeders \u2014every effort must be made to group-house rats whenever it does not interfere with the experimental design. Post-operative rats may or may not be group-housed, again depending on their postoperative needs and the experimental design.<\/p>\n<p>Cage sizes may vary in different facilities. The Colony Manager is encouraged to ask BU ASC staff for information on the size of cages in which their rats are housed.<\/p>\n<h3 id=\"static-rate-cages-with-filter-tops-or-individually-ventilated-cages\">Static Rate Cages with Filter Tops OR Individually-Ventilated Cages<\/h3>\n<p>A. Static rat cages with filter tops and an inside floor area of 170 square inches OR individually ventilated cages (IVC) with filter tops and an inside floor area of 160 square inches.<\/p>\n<ul>\n<li>One adult female rat with one nursing litter are allowed per cage<\/li>\n<li>One retired male breeder per cage<\/li>\n<li>Eight (8) young rats up to 100 gm per cage.<\/li>\n<li>Six (6) rats weighing up to 200 gm each per cage.<\/li>\n<li>Four (4) rats weighing up to 300 g each per cage.<\/li>\n<li>Three (3) rats weighing up to 400 g each per cage.<\/li>\n<li>Two (2) rats weighing up to 500 g each per cage.<\/li>\n<li>Rats over 500 g may be singly housed, or may be pair-housed, as determined by the PI and approved by the veterinarian and IACUC.<\/li>\n<\/ul>\n<h2 id=\"defining-responsibility-for-separating-and-weaning-mice-and-rats\">Defining Responsibility for Separating and Weaning Mice and Rats<\/h2>\n<h3 id=\"designated-colony-manager\">Designated Colony Manager<\/h3>\n<p>The designated colony manager (research staff or BU ASC staff) is responsible for cage card documentation and for separating and weaning according to the above guidelines.<\/p>\n<h3 id=\"pi-research-staff\">PI\/Research Staff<\/h3>\n<h4>BU ASC Actions in Cases of Overcrowding<\/h4>\n<ol>\n<li>The BU ASC staff checks for overcrowding (O\/C) and pregnancy when performing daily health checks and when changing cages. Any cages that are overcrowded according to standards defined above are marked with a Problem Notification\u2014O\/C Card, dated, and initialed.<\/li>\n<li>When overcrowding is noted, the responsible individual, the designated colony manager, is given up to 48 hours to correct the problem, depending on the severity of the overcrowding. Note: Weekends and holidays count as days and are not exempt.<\/li>\n<li>If overcrowding is not addressed within the allotted time, BU ASC staff separates the mice and Special Service charges will be incurred at a minimum of 15 minutes.<\/li>\n<li>When a harem-housed mouse is noticeably pregnant (usually 14 days gestation), she needs to be separated within 48 hours. However, if a female seems to be about to give birth, she is promptly separated.<\/li>\n<li>When two litters, one newborn and one previous litter, are in one cage, separation is performed as soon as possible. In such a case, the BU ASC staff separates the older pups into separate cages and gives a few food pellets on the cage floor. Female and newborn pups are left in the breeding cage.<\/li>\n<li>Any time a cage is significantly O\/C and the welfare of the animals is at stake (Emergency O\/C), the animals are promptly separated into acceptable group sizes.<\/li>\n<li>Adding\/updating the number of cages is documented on the white cage card by the colony manager or the person who separates the mice.<\/li>\n<li>When the overcrowding is corrected, the O\/C Card is removed.<\/li>\n<\/ol>\n<p>In all cases where ASC staff are performing separations, there will be a Special Service charge for a minimum of 15 minutes.<\/p>\n<h2 id=\"counting-rodents-including-but-not-limited-to-mice-and-rats\">Counting Rodents (including but not limited to mice and rats)<\/h2>\n<p>All rodents generated by in-house breeding need to be included in protocol number totals regardless of their scientific value (e.g., desired versus unwanted genotype) using the following guidelines:<\/p>\n<ul>\n<li>All rodents in each litter will be counted at the time the first procedure is performed on them. Procedures include but are not limited to cage changing, experimentation, culling, tissue collection for genotyping, weaning, euthanasia, and\/or incoming transfer.<\/li>\n<li>Animals coming from separate breeding protocols (e.g., MART) should be counted on the initial breeding protocol AND the new protocol to which they are transferred. If animals are returned to the same breeding colony protocol following experimentation, they should not be counted again for that initial breeding protocol, though that may require tracking outside of AOps.<\/li>\n<\/ul>\n<h2 id=\"references\">References<\/h2>\n<p>Guide for the Care and Use of Laboratory Animals. 2011. NRC ILAR. P.56. Table 3.2. Recommended Minimum Space for Commonly Used Laboratory Rodents Housed in Groups.<\/p>\n<p><em>BU IACUC Approved October 2010; Revised January 2014; Reviewed June 2019; Revised April 2022; Revised and Approved January 3, 2023; Revised and Approved December 2, 2025<\/em><\/p>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Boston University is committed to observing federal policies and regulations and AAALAC international standards and guidelines for the humane care and use of animals. Mice and Rats have short gestation times and large litters. Therefore, cages may become overcrowded quickly if the individual responsible for managing the breeding colony and separating animals at the proper [&hellip;]<\/p>\n","protected":false},"author":24171,"featured_media":0,"parent":2310,"menu_order":1,"comment_status":"closed","ping_status":"closed","template":"page-templates\/chapter-navigation.php","meta":[],"_links":{"self":[{"href":"https:\/\/www.bu.edu\/research\/wp-json\/wp\/v2\/pages\/61237"}],"collection":[{"href":"https:\/\/www.bu.edu\/research\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.bu.edu\/research\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.bu.edu\/research\/wp-json\/wp\/v2\/users\/24171"}],"replies":[{"embeddable":true,"href":"https:\/\/www.bu.edu\/research\/wp-json\/wp\/v2\/comments?post=61237"}],"version-history":[{"count":4,"href":"https:\/\/www.bu.edu\/research\/wp-json\/wp\/v2\/pages\/61237\/revisions"}],"predecessor-version":[{"id":61241,"href":"https:\/\/www.bu.edu\/research\/wp-json\/wp\/v2\/pages\/61237\/revisions\/61241"}],"up":[{"embeddable":true,"href":"https:\/\/www.bu.edu\/research\/wp-json\/wp\/v2\/pages\/2310"}],"wp:attachment":[{"href":"https:\/\/www.bu.edu\/research\/wp-json\/wp\/v2\/media?parent=61237"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}