{"id":28107,"date":"2020-09-01T09:44:08","date_gmt":"2020-09-01T13:44:08","guid":{"rendered":"https:\/\/www.bu.edu\/cise\/?p=28107"},"modified":"2022-02-02T10:59:29","modified_gmt":"2022-02-02T15:59:29","slug":"interdisciplinary-team-wins-1-5m-nsf-grant","status":"publish","type":"post","link":"https:\/\/www.bu.edu\/cise\/interdisciplinary-team-wins-1-5m-nsf-grant\/","title":{"rendered":"ENG Interdisciplinary Team Wins NSF Grant to Create Smart Biosensors"},"content":{"rendered":"<figure id=\"attachment_28485\" aria-describedby=\"caption-attachment-28485\" style=\"width: 198px\" class=\"wp-caption alignleft\"><img loading=\"lazy\" src=\"\/cise\/files\/2020\/09\/Prof_Densmore.jpg\" alt=\"\" width=\"188\" height=\"188\" class=\"wp-image-28485\" srcset=\"https:\/\/www.bu.edu\/cise\/files\/2020\/09\/Prof_Densmore.jpg 426w, https:\/\/www.bu.edu\/cise\/files\/2020\/09\/Prof_Densmore-150x150.jpg 150w, https:\/\/www.bu.edu\/cise\/files\/2020\/09\/Prof_Densmore-300x300.jpg 300w, https:\/\/www.bu.edu\/cise\/files\/2020\/09\/Prof_Densmore-100x100.jpg 100w\" sizes=\"(max-width: 188px) 100vw, 188px\" \/><figcaption id=\"caption-attachment-28485\" class=\"wp-caption-text\">Associate Prof. Douglas Densmore (ECE)<\/figcaption><\/figure>\n<p><span>Professors\u00a0<\/span>Douglas Densmore <span>(ECE) and\u00a0<\/span>Rabia Yazicigil <span>(ECE, CISE faculty affiliate) were awarded a $1.5M grant by the National Science Foundation for project entitled \u201c<em>SemiSynBio-II: Hybrid Bio-Electronic Microfluidic Memory Arrays for Large Scale Testing and Remote Deployment.<\/em>\u201d Professor\u00a0<\/span>Ahmad (Mo) Khalil<span>\u00a0and Professor\u00a0<\/span>Wilson Wong<span>\u00a0of BME are also Co-PIs on the grant.\u00a0<\/span><\/p>\n<p><span>The award is for a three-year project aiming to leverage the memory of complex genetic systems in order to create smart biosensors. Bacteria or mamalia cells, living systems, will be able to \u201cremember\u201d things they have seen in their environment. Using these engineered cellular memory elements, Densmore and his team will create smart biosensors. By creating artificial environments using microfluidic devices,\u00a0<\/span><span>the\u00a0<\/span><span>team will then generate custom biological memory elements for those devices. The devices will be equipped with electronic technology that can detect and respond to biological changes. When these devices are in \u201cswarms,\u201d they can collectively act as smart biosensors in the environment.\u00a0<\/span><\/p>\n<figure id=\"attachment_28472\" aria-describedby=\"caption-attachment-28472\" style=\"width: 220px\" class=\"wp-caption alignleft\"><img loading=\"lazy\" src=\"\/cise\/files\/2020\/10\/Screen-Shot-2020-10-31-at-11.27.20-AM.png\" alt=\"\" width=\"210\" height=\"208\" class=\"wp-image-28472\" srcset=\"https:\/\/www.bu.edu\/cise\/files\/2020\/10\/Screen-Shot-2020-10-31-at-11.27.20-AM.png 298w, https:\/\/www.bu.edu\/cise\/files\/2020\/10\/Screen-Shot-2020-10-31-at-11.27.20-AM-150x150.png 150w, https:\/\/www.bu.edu\/cise\/files\/2020\/10\/Screen-Shot-2020-10-31-at-11.27.20-AM-100x100.png 100w\" sizes=\"(max-width: 210px) 100vw, 210px\" \/><figcaption id=\"caption-attachment-28472\" class=\"wp-caption-text\">CISE Faculty Affiliate, Assistant Prof. Rabia Yazicigil (ECE)<\/figcaption><\/figure>\n<p><span>This proposal pushes past standard techniques<\/span><span>\u00a0<\/span><span>only involving recombinase and chromatin-based genetic memories. The memories will be more vigorous, longer<\/span><span>\u00a0<\/span><span>lasting, and higher capacity than previously-published elements in the field. Thousands of memories will be created with a highly-automated academic\u00a0<\/span><a href=\"http:\/\/www.damplab.org\/\"><span>cloud lab<\/span><\/a><span>\u00a0that will simultaneously create a modular library of the memory elements. The devices will have custom-designed semiconductor-based electronics that are manufactured to measure biological outputs and use wireless communication to report results and control the microfluidic operations.\u00a0<\/span><\/p>\n<figure id=\"attachment_33839\" aria-describedby=\"caption-attachment-33839\" style=\"width: 210px\" class=\"wp-caption alignright\"><img loading=\"lazy\" src=\"\/cise\/files\/2020\/09\/Ahmad-Mo-Khalil-BME.jpeg\" alt=\"\" width=\"200\" height=\"200\" class=\"wp-image-33839\" srcset=\"https:\/\/www.bu.edu\/cise\/files\/2020\/09\/Ahmad-Mo-Khalil-BME.jpeg 225w, https:\/\/www.bu.edu\/cise\/files\/2020\/09\/Ahmad-Mo-Khalil-BME-150x150.jpeg 150w, https:\/\/www.bu.edu\/cise\/files\/2020\/09\/Ahmad-Mo-Khalil-BME-100x100.jpeg 100w\" sizes=\"(max-width: 200px) 100vw, 200px\" \/><figcaption id=\"caption-attachment-33839\" class=\"wp-caption-text\">Associate Prof. Ahmad (Mo) Khalil (BME)<\/figcaption><\/figure>\n<p><span>The microfluidic and electronic designs and software are going to be open source, and the genetic memory elements will be available to the community through Addgene. Additionally, the circuit design rules will be public via the\u00a0<\/span><a href=\"http:\/\/www.nonasoftware.org\/\"><span>Nona Research Foundation<\/span><\/a><span>. There will be more than 48 Boston University undergraduate students mentored during the project period through the\u00a0<\/span><a href=\"http:\/\/www.stempathways.org\/\"><span>STEM Pathways program<\/span><\/a><span>\u00a0sponsored by NSF and the BU DAMP Lab rotation program. The academic and industrial community will be engaged through participation in conferences, on-going work with the NSF iCorps program, and Principal Investigator outreach to the biotechnology commercialization ecosystem in the Boston area.<\/span><\/p>\n<figure id=\"attachment_35840\" aria-describedby=\"caption-attachment-35840\" style=\"width: 170px\" class=\"wp-caption alignleft\"><img loading=\"lazy\" src=\"\/cise\/files\/2020\/09\/BME-Wilson-Wong.png\" alt=\"\" width=\"160\" height=\"179\" class=\"wp-image-35840\" \/><figcaption id=\"caption-attachment-35840\" class=\"wp-caption-text\">Associate Prof. Wilson Wong (BME)<\/figcaption><\/figure>\n<p><span>Densmore is the Lead PI on the NSF Expeditions in Computing\u2019s \u201cLiving Computing Project\u201d. He is also an NSF CAREER award recipient, founding member of BU\u2019s Biological Design Center, and former Hariri Institute Faculty Fellow. He is currently a senior member of the Association for Computing Machinery (ACM) and IEEE as well as the director of BU\u2019s Design, Automation, Manufacturing, and Prototyping (DAMP) Lab which was used to develop BU\u2019s in-house COVID-19 testing facility.<\/span><\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<figure id=\"attachment29069\" aria-describedby=\"caption-attachment29069\" class=\"wp-caption alignleft\"><figcaption id=\"caption-attachment29069\" class=\"wp-caption-text\"><\/figcaption><\/figure>\n<p>&nbsp;<\/p>\n<figure id=\"attachment29076\" aria-describedby=\"caption-attachment29076\" class=\"wp-caption alignright\"><figcaption id=\"caption-attachment29076\" class=\"wp-caption-text\"><\/figcaption><\/figure>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Professors\u00a0Douglas Densmore (ECE) and\u00a0Rabia Yazicigil (ECE, CISE faculty affiliate) were awarded a $1.5M grant by the National Science Foundation for project entitled \u201cSemiSynBio-II: Hybrid Bio-Electronic Microfluidic Memory Arrays for Large Scale Testing and Remote Deployment.\u201d Professor\u00a0Ahmad (Mo) Khalil\u00a0and Professor\u00a0Wilson Wong\u00a0of BME are also Co-PIs on the grant.\u00a0 The award is for a three-year project aiming [&hellip;]<\/p>\n","protected":false},"author":18553,"featured_media":0,"comment_status":"closed","ping_status":"open","sticky":false,"template":"","format":"standard","meta":[],"categories":[127,201],"tags":[],"_links":{"self":[{"href":"https:\/\/www.bu.edu\/cise\/wp-json\/wp\/v2\/posts\/28107"}],"collection":[{"href":"https:\/\/www.bu.edu\/cise\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.bu.edu\/cise\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.bu.edu\/cise\/wp-json\/wp\/v2\/users\/18553"}],"replies":[{"embeddable":true,"href":"https:\/\/www.bu.edu\/cise\/wp-json\/wp\/v2\/comments?post=28107"}],"version-history":[{"count":22,"href":"https:\/\/www.bu.edu\/cise\/wp-json\/wp\/v2\/posts\/28107\/revisions"}],"predecessor-version":[{"id":35842,"href":"https:\/\/www.bu.edu\/cise\/wp-json\/wp\/v2\/posts\/28107\/revisions\/35842"}],"wp:attachment":[{"href":"https:\/\/www.bu.edu\/cise\/wp-json\/wp\/v2\/media?parent=28107"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.bu.edu\/cise\/wp-json\/wp\/v2\/categories?post=28107"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.bu.edu\/cise\/wp-json\/wp\/v2\/tags?post=28107"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}