{"id":967,"date":"2018-11-14T18:20:01","date_gmt":"2018-11-14T23:20:01","guid":{"rendered":"https:\/\/www.bu.edu\/bravi\/?page_id=967"},"modified":"2019-02-14T13:33:01","modified_gmt":"2019-02-14T18:33:01","slug":"available-software","status":"publish","type":"page","link":"https:\/\/www.bu.edu\/bravi\/available-software\/","title":{"rendered":"Available Software"},"content":{"rendered":"<ul>\n<li><strong><a href=\"\/bravi\/files\/2018\/11\/USTPL.zip\">Uniform Scores Test for Phase Locking<\/a><\/strong>\n<ul>\n<li>Description: Implementation of the Uniform Scores Test for Phase Locking.<\/li>\n<li>Requirements: MATLAB r2017a, <a href=\"https:\/\/www.mathworks.com\/matlabcentral\/fileexchange\/10676-circular-statistics-toolbox-directional-statistics\">Circular Statistics Toolbox<\/a>, <a href=\"http:\/\/www.fieldtriptoolbox.org\/\">FieldTrip Toolbox<\/a><\/li>\n<li><strong>Reference<\/strong>: Rana KD, Vaina LM, H\u00e4m\u00e4l\u00e4inen MS. (2013).\u00a0A fast statistical significance test for baseline correction and comparative analysis in phase locking.\u00a0<em>Frontiers in Neuroinformatics, 7<\/em>(3):1-10. <a href=\"\/bravi\/files\/2018\/11\/fninf-07-000032.pdf\">[PDF]<\/a><strong><\/strong><\/li>\n<\/ul>\n<\/li>\n<li><strong><a href=\"\/bravi\/files\/2018\/11\/NBSS.zip\">Nulling Beamformer with Subspace Suppression<\/a><\/strong>\n<ul>\n<li>Description: Implementation of the nulling beamformer with subspace suppression. Input requires a set of cortical patches defined through MNE software.<\/li>\n<li>Requirements: MATLAB r2017a, <a href=\"https:\/\/martinos.org\/mne\/stable\/index.html\">MNE<\/a><\/li>\n<li><strong>Reference<\/strong>: Vaina LM, Rana K, Hamalainen M (2018). Improving the Nulling Beamformer using Subspace Suppression.\u00a0<em>Frontiers in Computational Neuroscience. <\/em><a href=\"\/bravi\/files\/2018\/11\/FrontiersIn-Neuroscience2018-1.pdf\">[PDF]<\/a><strong><\/strong><\/li>\n<\/ul>\n<\/li>\n<li><strong><a href=\"https:\/\/www.bu.edu\/bravi\/bravishell-instructions\/\">BraviShell<\/a><\/strong>\n<ul>\n<li>Description: Psychophysical Experiments developed in Brain and Vision Research laboratory, both for behavioral studies and for functional imaging studies (fMRI or MEG) were written in our home-grown versatile matlab software (BraviShell) which is an extension of <a href=\"http:\/\/psychtoolbox.org\/\">PsychToolbox<\/a>(Brainard, 1997; Pelli, 1997; Kleiner et al, 2007). <a>The powerpoint presentation<\/a>describes how BraviShell is used to develop experiments, collect data and in some cases does an analysis of single subjects data. Under the direction of the lab director, Professor Lucia M Vaina, the main developers of Bravishell were Scott Beardsley, PhD; Finnegan Calabro, PhD, Robert Pitts, PhD, and Kunjan Rana, PhD.<\/li>\n<li>Requirements: Mac machine, MATLAB r2017a, <a href=\"http:\/\/psychtoolbox.org\/\">PsychToolbox<\/a><\/li>\n<\/ul>\n<\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>Uniform Scores Test for Phase Locking Description: Implementation of the Uniform Scores Test for Phase Locking. Requirements: MATLAB r2017a, Circular Statistics Toolbox, FieldTrip Toolbox Reference: Rana KD, Vaina LM, H\u00e4m\u00e4l\u00e4inen MS. (2013).\u00a0A fast statistical significance test for baseline correction and comparative analysis in phase locking.\u00a0Frontiers in Neuroinformatics, 7(3):1-10. [PDF] Nulling Beamformer with Subspace Suppression Description: [&hellip;]<\/p>\n","protected":false},"author":15420,"featured_media":0,"parent":0,"menu_order":147,"comment_status":"closed","ping_status":"closed","template":"page-templates\/no-sidebars.php","meta":[],"_links":{"self":[{"href":"https:\/\/www.bu.edu\/bravi\/wp-json\/wp\/v2\/pages\/967"}],"collection":[{"href":"https:\/\/www.bu.edu\/bravi\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.bu.edu\/bravi\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.bu.edu\/bravi\/wp-json\/wp\/v2\/users\/15420"}],"replies":[{"embeddable":true,"href":"https:\/\/www.bu.edu\/bravi\/wp-json\/wp\/v2\/comments?post=967"}],"version-history":[{"count":4,"href":"https:\/\/www.bu.edu\/bravi\/wp-json\/wp\/v2\/pages\/967\/revisions"}],"predecessor-version":[{"id":1797,"href":"https:\/\/www.bu.edu\/bravi\/wp-json\/wp\/v2\/pages\/967\/revisions\/1797"}],"wp:attachment":[{"href":"https:\/\/www.bu.edu\/bravi\/wp-json\/wp\/v2\/media?parent=967"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}