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Selected Publications
Selected Journal Papers
- Wanunu, M. Chakrabarti, B. Mathé, J. Nelson, D. R. and A. Meller (2008) Orientation-dependent interactions of DNA with an a-Hemolysin Channel, Phys Rev. E, 77, 031904 (download).
- Soni G. and A. Meller (2007) Progress Towards ultrafast DNA sequencing using solid state nanopores. Clin. Chem. 3, 1996-01
- Kim, M-J., B. McNally, K. Murata and A. Meller (2007) Characteristics of solid-state nanometer pores fabricated using transmission electron microscope (TEM) Nanotechnology, 18, 205302.
- Dudko, O., J. Mathé, A. Szabo, A. Meller, and G. Hummer (2007) Extracting kinetics from single-molecule force spectroscopy: Nanopore unzipping of DNA hairpins, Biophys. J., 92, 4188-4195 (download)
- Wanunu, M. and A. Meller (2007) Chemically Modified Solid-State
Nanopores. Nano Letters, 7, 1580-85 (download), (also read Research Highlight, Nature, 447, 14 (2007)
- Hornblower, B., A. Coombs, R.D. Whitaker, A. Kolomeisky, Picone, S.J., A. Meller and M. Akeson
(2007) Single-Molecule Analysis of DNA-Protein Complexes Using Nanopores. Nature Methods, 4, 315-317 DOI: 10.1038/nmeth1021 (download)
- Edel, J., J. Eid and A. Meller (2007) Accurate single molecule FRET efficiency determination for surface immobilized DNA using maximum likelihood calculated lifetimes. J. Phys. Chem B., 111, DOI: 10.1021/jp066530k (download)
- Kim, M-J., M. Wanunu, C.D. Bell and A. Meller (2006) Rapid Fabrication of Uniform Size Nanopores and Nanopore Arrays for Parallel DNA Analysis. Adv. Mater. 18, 3149-3153. (download)
- Jan Bonthuis, D., J. Zhang, B. Hornblower, J. Mathé, B.I. Shklovskii and A. Meller (2006) Self-Energy-Limited Ion Transport in Subnanometer Channels. Phys. Rev. Lett. 97, 128104. (download)
- Mathé, J., A. Arinstein, Rabin Y. and A. Meller (2006) Equilibrium and irreversible unzipping of DNA in a nanopore, Europhys. Lett. 73 (1), 128-134 (download)
- Viasnoff, V., A. Meller and H. Isambert (2006) DNA nanomechanical switches under folding kinetics control. Nano Letters, 6, 101-104 (download)
- Sabanayagam, C.R., J.S. Eid and A. Meller (2005) Long time scale blinking kinetics of cyanine fluorophores conjugated to DNA and its effect on Förster resonance energy transfer. J. Chem. Phys. 123, 224708. (download)
- Mathé, J., A. Aksimentiev, D.R. Nelson, K. Schulten and A. Meller (2005) Orientation discrimination of single-stranded DNA inside the alpha-hemolysin membrane channel. Proc. Natl. Acad. Sci. U.S.A. 102, 12377-12382. (download)
- Sabanayagam, C.R., J.S. Eid and A. Meller (2005) Using fluorescence resonance energy transfer to measure distances along individual DNA molecules: Corrections due to nonideal transfer. J. Chem. Phys. 122, 061103. (download)
- Mathé, J., H. Visram, V. Viasnoff, Y. Rabin and A. Meller (2004) Nanopore unzipping of individual DNA hairpin molecules. Biophys. J. 87, 3205-3212. (download)
- Sabanayagam, C.R., J.S. Eid and A. Meller (2004) High-throughput scanning confocal microscope for single molecule analysis. Appl. Phys. Lett. 84, 1216-1218 (download).
- Bates, M., M. Burns and A. Meller (2003) Dynamics of single DNA molecules actively controlled inside a membrane channel. Biophys. J. 84, 2366-2372 (download).
- Meller, A., L. Nivon and D. Branton (2001) Voltage-Driven DNA Translocations through a Nanopore. Phys. Rev. Lett. 86, 3435-3438 (download).
- Meller, A. and D. Branton (2002) Single molecule measurements of DNA transport through a nanopore. Electrophoresis 23, 2583-2591.
- Meller, A., L. Nivon, E. Brandin, J. Golovchenko and D. Branton (2000) Rapid nanopore discrimination between single polynucleotide molecules. Proc. Natl. Acad. Sci. U.S.A. 97, 1079-1084 (download).
Selected Reviews and Book chapters
- Wanunu, M. and A. Meller (2008) Single Molecule Analysis of Nucleic Acids and DNA-protein Interactions using Nanopores, Laboratory Manual on Single Molecules, Eds. P. Selvin and T. Ha, Cold Spring Harbor Press.
- Lee, J.W. and A. Meller (2006). Rapid DNA Sequencing by Direct Nanoscale Reading of Nucleotide Bases on Individual DNA chains. In: Perspectives in Bioanalysis. K. Mitchelson (Ed.), Elsevier. (download)
- Meller, A. (2003) Dynamics of polynucleotide transport through nanometre-scale pores. J. Phys.: Condens. Matter 15, R581-R607. (download)
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