|
Home • Back to Data directory |
Microarray Experiment - Global analysis of gene expression patterns during disuse atrophy in rat skeletal muscle
Gene expression analysis of rat soleus muscles using Affymetrix GeneChips after 1, 4, 7 and 14 days of hindlimb unloading. Of the 8,799 probe sets on the U34A GeneChip, 426 were significantly changed by at least 2-fold with hindlimb unloading.
The following table is ordered by gene name.
probe_id - Affymetrix probe set ID (based on the GenBank accession sequence the probe set was developed from)
k_cluster - Cluster each gene was associated with after using a k-means clustering algorithm to divide genes into groups based on similarity in expression over the timecourse of unloading.
day01-day14 - Fold change at each time point calcualted as described.
function - The functional categories used were derived from Silicon Genetics and NCBI annotation records. Annotations were obtained for each gene from LocusLink and Unigene based on the GenBank sequences from which probes were derived. In the cases where rat functional information was incomplete, function was inferred based on curated homologs in mouse and/or human (HomoloGene).
possible_pathways - Notes based on the literature and functional annotations as to involvment in signaling pathways or cellular mechanisms
| Probe_ID | gene_name | day1 | day4 | day7 | day14 | function | possible_pathways | notes |
| M59861_at | 10-formyltetrahydrofolate dehydrogenase | 1.1 | 3.3 | 2.8 | 2.2 | metabolism; miscellaneous | ||
| rc_AA817846_at | 3-hydroxybutyrate dehydrogenase | -1.1 | -2.2 | -1.8 | -3.1 | protein turnover; metabolism | ||
| rc_AA892799_s_at | 3-phosphoglycerate dehydrogenase, ESTs, (rat) | 2.6 | 2.1 | 2.2 | 1.6 | protein turnover; metabolism; protein; amino acid | ||
| U70825_at | 5-oxoprolinase (ATP-hydrolysing) | 1.2 | 1.6 | 1.6 | 2.0 | protein turnover; metabolism; protein; amino acid | ||
| S50879_g_at | Acetylcholinesterase T subunit | 1.7 | 1.6 | 1.6 | 2.3 | contraction; unclassified; membrane depolarization | ||
| S50879_at | Acetylcholinesterase T subunit | 1.2 | 1.1 | 2.2 | 1.5 | contraction; unclassified; membrane depolarization | ||
| X80130cds_f_at | Actin, alpha- (cardiac) | -1.5 | -2.2 | -1.3 | -1.0 | contraction; embryonic; cytoskeleton/sarcomere | ||
| rc_AA866452_s_at | Actin, alpha- (cardiac) | -2.0 | -3.1 | -1.2 | 1.4 | contraction; embryonic; cytoskeleton/sarcomere | ||
| X80130cds_i_at | Actin, alpha- (cardiac) | -1.8 | -2.8 | -1.1 | 1.5 | contraction; embryonic; cytoskeleton/sarcomere | ||
| rc_AA800206_at | Actinin 1, alpha EST (rat) | -1.0 | -2.1 | -2.2 | -1.7 | contraction; unclassified; cytoskeleton/sarcomere | ||
| L10640_s_at | Activin type IIB receptor | 3.1 | 2.5 | 5.1 | 5.8 | regulatory; growth/proliferation; growth factor activity; TGF-beta | transmembrane receptor; secreted growth factor activity; SMAD; TGFbeta receptor signaling pathway | |
| M98819mRNA_s_at | Adenosine monophosphate deaminase 1 | 1.1 | 1.6 | 2.0 | 1.9 | protein turnover; metabolism; protein; amino acid | ||
| rc_AI176052_at | Adenylate kinase 3 | 1.2 | 2.2 | 1.9 | 1.9 | metabolism; carbohydrate; glycolytic | ||
| X59864mRNA_at | Adult skeletal muscle gene 15; H19 | -1.0 | -2.1 | -2.1 | -1.4 | regulatory; growth/proliferation; proliferation | IGF; development; translation regulator; 4E-BP1; p70(S6k) | The results showed that the well-documented early effects of clenbuterol on protein metabolism were preceded by elevated levels of IGF-II and H19 transcripts together with increased phosphorylation of eukaryotic initiation factor (eIF)4E binding protein-1 |
| X59864mRNA_g_at | Adult skeletal muscle gene 15; H19 | -1.0 | -2.3 | -2.3 | -1.5 | regulatory; growth/proliferation; proliferation | IGF; development; translation regulator; 4E-BP1; p70(S6k) | The results showed that the well-documented early effects of clenbuterol on protein metabolism were preceded by elevated levels of IGF-II and H19 transcripts together with increased phosphorylation of eukaryotic initiation factor (eIF)4E binding protein-1 |
| AF001898_at | Aldehyde dehydrogenase 1 | 1.3 | 1.4 | 2.2 | 1.5 | metabolism; aldehyde | ||
| rc_AI172017_at | aldehyde dehydrogenase 2 | 1.4 | 2.0 | 1.9 | 1.3 | metabolism; aldehyde | ||
| M12919mRNA#2_at | Aldolase A, fructose-bisphosphate | -1.0 | 1.2 | 1.9 | 2.4 | metabolism; carbohydrate; glycolytic | ||
| rc_AA924326_s_at | Aldolase A, fructose-bisphosphate | 1.0 | 1.4 | 2.3 | 2.8 | metabolism; carbohydrate; glycolytic | ||
| X60351cds_s_at | Alpha B-crystallin | -1.4 | -6.6 | -5.9 | -4.2 | protein turnover; protein folding | ||
| AF051895_at | Annexin 5 | -1.2 | -2.2 | -2.1 | -2.2 | regulatory; growth/proliferation; proliferation | apoptosis; calcium signaling | |
| D42137exon_s_at | Annexin 5 | -1.0 | -2.5 | -2.4 | -2.1 | regulatory; growth/proliferation; proliferation | apoptosis; calcium signaling | |
| J03627_at | Annexin II ligand, calpactin I (S100a10) | -1.2 | -1.8 | -2.0 | -2.4 | regulatory; signal transduction | calcium signaling; cell cycle; differentiation | |
| U49062_at | Antigen CD24 | 3.7 | 5.7 | 11.0 | 13.0 | stress; immune; antigen | ||
| U49062_g_at | Antigen CD24 | 2.5 | 2.8 | 2.7 | 1.8 | stress; immune; antigen | ||
| rc_AA818025_g_at | Antigen CD59 | 1.6 | 2.0 | 2.2 | 2.7 | stress; immune; antigen | ||
| rc_AA818025_at | Antigen CD59 | 1.4 | 1.8 | 1.8 | 2.2 | stress; immune; antigen | ||
| S76779_s_at | apolipoprotein E | 1.6 | 1.9 | 2.1 | 1.9 | metabolism; lipid; uptake and transport | ||
| U47315_s_at | Apoptosis-regulating basic protein | 1.2 | -2.1 | -1.9 | -2.0 | regulatory; growth/proliferation; proliferation; apoptosis | apoptosis; | |
| D44495_s_at | apurinic/apyrimidinic endonuclease 1 | 2.1 | 1.9 | 1.4 | 1.3 | regulatory; transcription | cAMP responsive; DNA repair; stress or injury | |
| U14007_at | Aquaporin 4 | -1.1 | 1.4 | 3.4 | 3.3 | ion transport; sodium/phosphate symporter | water transport | |
| AB000507_at | Aquaporin 7 | -1.3 | -2.8 | -1.9 | -3.0 | ion transport; sodium/phosphate symporter | water transport | |
| J05210_g_at | ATP citrate lyase | 1.2 | 1.3 | 1.2 | 2.1 | metabolism; tricarboxylic acid cycle | ||
| D13123_s_at | ATP synthase, H+ transporting, mitochondrial F0 complex, subunit 9 | -1.1 | -1.7 | -2.2 | -1.8 | metabolism; respiratory chain | ||
| rc_AI177026_at | ATPase Na K transporting alpha 2 | 1.6 | 2.5 | 2.7 | 1.9 | ion transport; sodium/potassium | ||
| rc_AI112173_at | ATPase Na K transporting beta 1 | -1.2 | -2.2 | -1.6 | -1.2 | ion transport; sodium/potassium | ||
| rc_AI230614_s_at | ATPase Na K transporting beta 1 | -1.0 | -2.1 | -1.4 | -1.4 | ion transport; sodium/potassium | ||
| M99223_at | ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 | 1.2 | 2.9 | 3.8 | 5.9 | contraction; fast; membrane depolarization | ||
| X96394_at | ATP-binding cassette, sub-family C ( CFTR/MRP), member 1a | 5.4 | 2.6 | 3.3 | 3.1 | stress; oxidative/toxic | ||
| S48813_s_at | Beta-adrenergic receptor kinase | -1.1 | 1.6 | 3.7 | 6.8 | regulatory; signal transduction | stress or injury; GTP signaling | |
| AF056034_s_at | b-Nexilin | 1.0 | -2.0 | -2.1 | -1.2 | regulatory; adhesion | adhesion | |
| rc_AA799423_at | b-Nexilin | -1.0 | -1.9 | -2.1 | -1.4 | regulatory; adhesion | adhesion | |
| J02827_at | Branched chain alpha-ketoacid dehydrogenase subunit E1 alpha | 1.6 | 2.1 | 2.1 | 1.8 | protein turnover; metabolism; protein; amino acid | ||
| U35774_at | Branched chain aminotransferase 1, cytosolic | -1.5 | -2.3 | -1.4 | -1.0 | protein turnover; metabolism; protein; amino acid | ||
| rc_AA891614_at | Calcium channel, voltage gated (Tpcn1) | 1.2 | 1.7 | 1.1 | 2.4 | contraction; membrane depolarization | ||
| Y09453cds_at | Calcium channel, voltage-dependent, gamma subunit 1 | 1.2 | 1.9 | 1.9 | 2.3 | contraction; fast; membrane depolarization | ||
| M16112_at | Calcium/calmodulin-dependent protein kinase II beta | 1.8 | -1.5 | -1.5 | -2.8 | regulatory; signal transduction | calcium signaling | |
| S71570_s_at | Calmodulin-dependent protein kinase 2 gamma | 2.0 | 2.1 | 2.0 | 1.7 | regulatory; signal transduction | calcium signaling | |
| X56729mRNA_at | Calpastatin/CANP inhibitor | 2.8 | 4.0 | 1.3 | 4.5 | protein turnover; proteolysis; protease inhibitor; calpain | ||
| U33287_at | Calsequestrin 2 | 1.1 | -2.7 | -4.1 | -3.0 | contraction; slow; cytoskeleton/sarcomere | ||
| U04835_at | cAMP responsive element modulator (CREM) | -11.2 | -2.5 | -2.0 | -1.4 | regulatory; transcription | cAMP responsive; translation regulator | |
| S66024_at | cAMP responsive element modulator (CREM) | -8.6 | -6.6 | -1.5 | -2.7 | regulatory; transcription | cAMP responsive; translation regulator | |
| AF037072_at | Carbonic anhydrase 3 | -1.1 | -4.9 | -8.8 | -7.7 | metabolism; miscellaneous | ||
| X65296cds_s_at | carboxylesterase | 1.7 | 9.6 | 4.0 | 3.2 | metabolism; lipid | ||
| L46791_at | carboxylesterase 3 | 7.6 | 10.6 | 1.0 | 2.6 | metabolism; lipid | ||
| U50736_s_at | Cardiac ankyrin repeat protein (Carp) | -2.5 | -1.7 | -2.5 | -6.7 | regulatory; transcription | cytokine signaling; differentiation; development | |
| D90404_at | Cathepsin C | 1.8 | 2.1 | 2.4 | 3.0 | protein turnover; proteolysis; protease; lysosomal | ||
| D90404_g_at | Cathepsin C (dipeptidyl peptidase I) | -1.3 | 1.1 | 5.6 | 4.0 | protein turnover; proteolysis; protease; lysosomal | ||
| X54467_at | Cathepsin D (preprocathepsin) | 1.2 | 2.3 | 1.9 | 1.5 | protein turnover; proteolysis; protease; lysosomal | ||
| S85184_at | Cathepsin L | 1.1 | 3.3 | 5.1 | 1.6 | protein turnover; proteolysis; protease; lysosomal | ||
| rc_AI176595_s_at | Cathepsin L | 1.4 | 3.1 | 4.6 | 2.2 | protein turnover; proteolysis; protease; lysosomal | ||
| S85184_g_at | Cathepsin L proenzyme | 1.2 | 1.7 | 2.6 | 1.4 | protein turnover; proteolysis; protease; lysosomal | ||
| rc_AI014091_at | Cbp/p300-interacting transactivator 2; Mrg1 | 2.8 | 2.0 | 2.6 | 1.3 | regulatory; transcription | development; apoptosis; myogenesis | |
| rc_AA900476_g_at | Cbp/p300-interacting transactivator 2; Mrg1 | 1.7 | 1.5 | 2.2 | 1.5 | regulatory; transcription | development; apoptosis; myogenesis | |
| rc_AA900476_at | Cbp/p300-interacting transactivator 2; Mrg1 | 5.2 | 2.2 | 6.6 | 3.4 | regulatory; transcription | development; apoptosis; myogenesis | |
| AB000199_at | CCA2 protein | -1.8 | -2.1 | -2.7 | -2.6 | unknown | ||
| D26439_at | CD1D antigen | 2.0 | 1.7 | 1.3 | 1.3 | stress; immune; antigen | ||
| X13044_g_at | CD74 antigen (invariant polpypeptide of major histocompatibility class II antigen-associated) | -1.1 | 1.3 | 2.1 | 1.6 | stress; oxidative/toxic | ||
| X13044_at | CD74 antigen (invariant polpypeptide of major histocompatibility class II antigen-associated) | 1.0 | 1.3 | 2.3 | 1.3 | stress; immune; antigen | ||
| X94351_at | CDC-like kinase 3 | 2.3 | 1.9 | 1.6 | 1.5 | regulatory; signal transduction | SR protein localization; mRNA splicing | The prototype, murine Clk1 (mClk1), is a nuclear dual-specificity kinase that can interact with, and cause the nuclear redistribution of, SR proteins. |
| rc_AA860015_at | cDNA clone 617608 | -1.2 | -2.1 | -1.1 | -1.1 | unknown | ||
| rc_AA858588_g_at | cDNA clone 864365 | 1.6 | 2.0 | 2.5 | 1.6 | unknown | ||
| rc_AA817854_s_at | Ceruloplasmin (ferroxidase) | 1.1 | 1.4 | 3.7 | 2.7 | stress; oxidative/toxic | ||
| L33869_at | Ceruloplasmin (ferroxidase) | -1.4 | 1.3 | 2.0 | 2.5 | stress; oxidative/toxic | ||
| X62894_at | Chloride channel 1 (skeletal muscle) | 2.5 | 1.3 | 3.1 | 4.2 | contraction; unclassified; membrane depolarization | ||
| AF072892_s_at | Chondroitin sulfate proteoglycan 2 | -2.1 | -1.8 | -1.7 | -1.3 | regulatory; growth/proliferation; ECM | ||
| rc_AI175959_at | c-Jun, EST (human) | 1.3 | 1.7 | 3.1 | 2.2 | regulatory; transcription | apoptosis; SMAD; AP1; NFkB; ferritin | |
| X53054_at | Class II MHC RT1.D(n) beta chain precursor | 1.0 | 1.2 | 10.8 | 4.2 | stress; immune; antigen | ||
| X53054_g_at | Class II MHC RT1.D(n) beta chain precursor | -1.1 | 1.1 | 2.4 | 1.3 | stress; immune; antigen | ||
| AB000362_at | Cold inducible RNA-binding protein | 2.7 | 3.4 | 2.9 | 2.7 | regulatory; mRNA processing | RNA stability; shock | |
| rc_AI231472_s_at | Collagen, alpha 1 type I | 1.1 | -1.4 | -1.5 | -2.2 | ECM structrual/regulator | ||
| U75405UTR#1_f_at | Collagen, alpha 1 type I | -1.0 | -1.1 | -1.6 | -2.0 | ECM structrual/regulator | ||
| rc_AI179399_at | Collagen, alpha 2 type V | -1.1 | -1.2 | -1.5 | -2.0 | ECM structrual/regulator | ||
| U42719_at | Complement component 4 | 1.9 | 2.6 | 1.3 | 3.4 | protein turnover; proteolysis; protease | ||
| M31725_at | Contactin 2 | 2.2 | 1.8 | 1.8 | -1.0 | regulatory; adhesion | development; adhesion; membrane targeting | |
| M55534mRNA_s_at | Crystallin, alpha polypeptide 2 | -1.2 | -6.5 | -6.2 | -4.7 | protein turnover; protein folding | ||
| U21101_at | cyclic GMP stimulated phosphodiesterase | 1.3 | 2.9 | 2.4 | 3.1 | regulatory; signal transduction | cAMP regulator; | |
| U24174_at | Cyclin-dependent kinase inhibitor 1A (P21) | 1.9 | 2.0 | 14.2 | 2.5 | regulatory; growth/proliferation; proliferation; cell cycle arrest | cytokine signaling; G1 cyclin/CDK complex inhibtion; p53; AKT/PKB induced; apoptosis; differentiation; development; cell cycle arrest; tumor suppressor; oncogenesis | |
| L41275cds_s_at | Cyclin-dependent kinase inhibitor 1A (P21) | 1.3 | 2.1 | 19.4 | 4.9 | regulatory; growth/proliferation; proliferation; cell cycle arrest | cytokine signaling; G1 cyclin/CDK complex inhibtion; p53; AKT/PKB induced; apoptosis; differentiation; development; cell cycle arrest; tumor suppressor; oncogenesis | |
| rc_AI231292_g_at | Cystatin C | 1.5 | 1.9 | 2.5 | 2.2 | protein turnover; proteolysis; protease inhibitor; cathepsin | ||
| rc_AI231292_at | Cystatin C | 1.4 | 2.1 | 3.2 | 3.1 | protein turnover; proteolysis; protease inhibitor; cathepsin | ||
| S61960_s_at | Cysteine conjugate beta-lyase | 2.2 | 2.4 | 1.6 | 1.2 | protein turnover; metabolism; protein; amino acid | ||
| rc_AA942685_at | Cysteine dioxygenase 1 | 1.4 | 3.2 | 3.1 | 1.8 | protein turnover; metabolism; protein; amino acid | ||
| Y12517cds_at | Cytochrome b5, outer mitochondrial membrane isoform | 3.1 | 1.1 | 1.2 | 1.4 | metabolism; respiratory | ||
| X64827cds_s_at | Cytochrome C oxidase subunit VIIIh (heart/muscle) | 1.2 | -1.4 | -1.6 | -2.6 | metabolism; respiratory | ||
| AF055884_s_at | DEAF-1 related transcriptional regulator (NUDR) | -1.5 | 1.3 | 1.8 | 2.2 | regulatory; transcription | ||
| rc_AI010581_at | Diazepam binding inhibitor | -1.0 | -2.0 | -3.0 | -2.0 | protein turnover; proteolysis; protease inhibitor | ||
| rc_AA799732_at | DiGeorge syndrome critical region gene 6; EST (mouse) | 1.4 | 2.3 | 1.4 | 1.4 | regulatory; growth/proliferation; ECM | ||
| rc_AA891107_at | Diphosphoinositol polyphosphate phosphohydolase t2 | -1.3 | -2.0 | -1.6 | -2.3 | regulatory; signaling | intracellular trafficking | The turnover of the "high energy" diphosphoinositol polyphosphates by Ca(2+)- and cyclic nucleotide-modulated enzymes is considered a regulatory, molecular switching activity. Target processes may include intracellular trafficking. |
| U14950_at | Discs, large homolog 1 (Drosophila) | 1.9 | 2.2 | 2.5 | 1.6 | regulatory; cytoskeletal regulator | PDZ; SH3; cytoskeletal organization; tumor supressor | |
| L32591mRNA_g_at | DNA-damage-inducible transcript 1 | 2.1 | 2.9 | 1.8 | 1.7 | regulatory; growth/proliferation; proliferation; cell cycle arrest | DNA repair; stress or injury; cell cycle arrest; p38/JNK; translation regulator; G2-M arrest; apoptosis | The protein encoded by this gene responds to environmental stresses by mediating activation of the p38/JNK pathway via MTK1/MEKK4 kinase. The DNA damage-induced transcription of this gene is mediated by both p53-dependent and -independent mechanisms. |
| L32591mRNA_at | DNA-damage-inducible transcript 1 | 1.4 | 4.1 | 1.9 | 2.3 | regulatory; growth/proliferation; proliferation; cell cycle arrest | DNA repair; stress or injury; cell cycle arrest; p38/JNK; translation regulator; G2-M arrest; apoptosis | The protein encoded by this gene responds to environmental stresses by mediating activation of the p38/JNK pathway via MTK1/MEKK4 kinase. The DNA damage-induced transcription of this gene is mediated by both p53-dependent and -independent mechanisms. |
| AA848268_at | DnaJ Homolog 5 | -1.0 | -1.9 | -2.2 | -1.9 | protein turnover; protein folding | ||
| rc_AA891542_at | DnaJ Homolog 5 | -2.3 | -1.7 | -1.5 | -1.6 | protein turnover; protein folding | ||
| rc_AI009806_at | Dynein, cytoplasmic, light chain 1 | -2.1 | -2.0 | -1.9 | -1.3 | cytoskeleton/sarcomere; structural | ||
| rc_AI233219_at | Endothelial cell-specific molecule 1; Pineal specific PG25 protein | -1.5 | -2.8 | -1.7 | -1.8 | regulatory; growth/proliferation; ECM | IGF; cytokine signaling; tumor supressor; secreted growth factor activity | insulin-like growth factor binding activity; secreted protein which is mainly expressed in the endothelial cells in human lung and kidney tissues |
| Z54212_at | Epithelial membrane protein 1 | -1.2 | -1.7 | -1.8 | -2.0 | regulatory; growth/proliferation; proliferation; oncogenesis/tumor supressor | secreted growth factor activity; cell proliferation; development; oncogenesis; differentiation | |
| rc_AA924925_at | ER transmembrane protein Dri 42 | 1.0 | 1.0 | 2.0 | 2.1 | regulatory; signal transduction | ||
| rc_AI639510_at | EST, clone rx02430, 3'end | 1.2 | 1.7 | 1.4 | 2.2 | unknown | ||
| rc_AA800168_at | EST, clone UI-R-C2p-rd-d-02-0-UI, 3'end | 1.1 | 1.2 | 2.1 | 1.3 | unknown | ||
| rc_AA800216_at | EST189713 | -1.3 | -2.2 | -2.7 | -1.6 | unknown | ||
| rc_AA800750_f_at | EST190247 | 1.0 | -1.5 | -2.1 | -2.7 | unknown | ||
| rc_AA893871_at | EST197674 Normalized rat placenta, Bento ESTs, Soares Rattus sp. cDNA clone RPLAM87 3' end, MRNA sequence | 1.2 | -1.1 | 1.6 | 2.1 | unknown | ||
| rc_AA800218_at | ESTs | 2.6 | 2.3 | 2.4 | 1.7 | unknown | ||
| rc_AA799971_g_at | ESTs | 1.1 | 1.4 | 1.9 | 2.0 | unknown | ||
| rc_AA892897_at | ESTs | 1.1 | -1.4 | -1.1 | -2.5 | unknown | ||
| rc_AA799971_at | ESTs | 1.1 | 1.2 | 1.4 | 2.1 | unknown | ||
| rc_AA799964_at | ESTs | 1.4 | 1.7 | 2.0 | 1.5 | unknown | ||
| rc_AA866259_at | Ests | 2.3 | 1.1 | 1.3 | 1.3 | unknown | ||
| rc_AI639170_at | ESTs | 2.2 | 1.1 | 1.8 | 2.1 | unknown | ||
| rc_AI639238_at | ESTs | 1.9 | 1.9 | 2.2 | 1.9 | unknown | ||
| rc_AI639499_s_at | ESTs | 1.4 | 2.4 | 2.9 | 2.0 | unknown | ||
| rc_AA799762_g_at | ESTs | 1.6 | 1.1 | 2.2 | 1.2 | unknown | ||
| rc_AA800197_at | ESTs | 1.3 | 1.6 | 2.6 | 1.0 | unknown | ||
| rc_AA891054_at | ESTs | 1.3 | 2.2 | 2.5 | 3.1 | unknown | ||
| rc_AA893208_at | ESTs | 2.3 | -1.1 | 1.5 | 1.1 | unknown | ||
| rc_AI639294_at | ESTs | 1.1 | 2.1 | 2.1 | 1.2 | unknown | ||
| rc_AA892280_at | ESTs | 2.8 | 2.1 | 2.4 | 1.6 | unknown | ||
| X07551cds_s_at | Ests | 1.1 | 1.5 | 2.0 | 1.9 | uknown | ||
| rc_AA875390_at | ESTs | -3.4 | 6.4 | 4.0 | -2.2 | unknown | ||
| rc_AA892549_at | ESTs | 2.3 | 1.1 | 1.9 | 3.1 | unknown | ||
| rc_AA859536_at | ESTs | -1.1 | -1.6 | -1.5 | -2.2 | unknown | ||
| rc_AI231778_at | ESTs | 2.6 | 1.8 | 1.8 | 1.8 | unknown | ||
| rc_AA799467_at | ESTs | 1.8 | 2.3 | 1.9 | 1.8 | unknown | ||
| rc_AA892353_at | Ests | -1.3 | 1.7 | 2.2 | 1.6 | unknown | ||
| rc_AA799457_at | ESTs | -1.7 | -2.1 | -2.1 | -2.1 | unknown | ||
| rc_AA799570_at | ESTs | -1.2 | -2.0 | -2.5 | -2.1 | unknown | ||
| rc_AI236601_at | ESTs | -1.3 | -2.0 | -1.8 | -2.4 | unknown | ||
| rc_AA893280_at | ESTs | -1.0 | -1.5 | -2.0 | -2.4 | unknown | ||
| rc_AA894304_at | ESTs | 1.4 | 1.7 | 1.9 | 2.5 | unknown | ||
| rc_AI639035_at | ESTs | 3.2 | 1.3 | 1.1 | 2.4 | unknown | ||
| rc_AA894092_at | ESTs | 1.1 | -2.5 | -3.6 | -5.8 | unknown | ||
| rc_AA799666_g_at | ESTs | -1.0 | -2.3 | -2.0 | -1.7 | unknown | ||
| rc_AI639163_at | ESTs | -1.4 | -1.5 | -1.7 | -2.3 | unknown | ||
| rc_H31964_at | ESTs | 1.4 | 1.1 | 1.2 | 2.0 | unknown | ||
| rc_AA892500_at | ESTs | 1.3 | 1.6 | 2.6 | 1.7 | unknown | ||
| rc_AA875132_at | ESTs | -1.1 | 1.7 | 3.1 | 6.8 | unknown | ||
| rc_AI233365_at | ESTs | 2.0 | 1.4 | 1.7 | 1.8 | unknown | ||
| rc_AA875032_at | ESTs | 1.3 | 1.8 | 2.1 | 1.1 | unknown | ||
| rc_AA891818_at | ESTs | -1.4 | -2.1 | -1.8 | -2.1 | unknown | ||
| rc_AA892531_at | ESTs | 1.2 | 1.4 | 2.1 | 2.0 | unknown | ||
| rc_AA858607_at | ESTs | 1.5 | 1.4 | 2.6 | 2.1 | unknown | ||
| rc_AA893043_at | ESTs | 1.0 | -1.4 | -1.5 | -2.6 | unknown | ||
| rc_AA892325_at | ESTs, Highly similar to choline/ethanolaminephosphotransferase [Homo sapiens] [H.sapiens] | 1.6 | -1.0 | 4.0 | 1.4 | unknown | ||
| rc_AI639088_s_at | ESTs, similar to RNA imprinted and accumulated in nucleus (mouse) | -1.3 | -4.1 | -3.1 | -3.0 | unknown | ||
| rc_AA818726_at | ESTs, Weakly similar to CYPM_RAT Peptidyl-prolyl cis-trans isomerase, mitochondrial precursor (PPIase) (Rotamase) (Cyclophilin F) [R.norvegicus] | 1.3 | 2.2 | 1.6 | 1.6 | unknown | ||
| rc_AA800808_at | ESTs, Weakly similar to S12207 hypothetical protein (B2 element) - mouse [M.musculus] | 1.7 | 2.4 | 1.4 | -1.7 | unknown | ||
| U59241_at | E-Tropomodulin | 1.4 | 2.9 | 4.7 | 4.1 | contraction; unclassified; cytoskeleton/sarcomere | ||
| X96426_at | eukaryotic elongation factor 2 kinase | 1.7 | 1.3 | 2.3 | 2.3 | protein turnover; translation; inhibitor | IGF | |
| rc_AI059692_s_at | eukaryotic elongation factor 2 kinase | 1.7 | 2.3 | 2.7 | 2.1 | protein turnover; translation; inhibitor | IGF | |
| U05014_at | eukaryotic translation initiation factor 4E binding protein 1 | 2.2 | 2.7 | 6.4 | 1.8 | protein turnover; translation; inhibitor | IGF | |
| U05014_g_at | eukaryotic translation initiation factor 4E binding protein 1 | 1.4 | 2.3 | 3.8 | 1.7 | protein turnover; translation; inhibitor | IGF | |
| J02773_at | Fatty acid binding protein, heart | -1.3 | -4.3 | -3.2 | -5.1 | metabolism; lipid; uptake and transport | ||
| X13527cds_s_at | fatty acid synthase | 1.5 | 1.1 | -1.2 | 2.1 | metabolism; lipid; FA oxidation | ||
| rc_AI236284_s_at | Fatty acid-Coenzyme A ligase, long chain 4 | 1.6 | 2.2 | 3.5 | 1.8 | metabolism; lipid biosynthesis | ||
| D85189_at | Fatty acid-Coenzyme A ligase, long chain 4 | -1.0 | 2.3 | 2.3 | 1.6 | metabolism; lipid biosynthesis | ||
| X14323cds_g_at | Fc receptor, IgG, alpha chain transporter | 1.7 | 2.2 | 2.4 | 2.3 | stress; immune; antigen | ||
| X56551cds_at | fibroblast growth factor 7 | 2.3 | 1.8 | 1.7 | 3.2 | regulatory; growth/proliferation; secreted growth factor | secreted growth factor activity; positive regulation of cell proliferation; differentiation | |
| rc_AA799773_g_at | Filamin, gamma-, EST (human) | -1.6 | -2.2 | -1.4 | -1.5 | regulatory; cytoskeletal regulator | cytoskeletal organization | |
| rc_AA799773_at | Filamin, gamma-, EST (human) | -1.7 | -2.3 | -1.3 | -1.2 | regulatory; cytoskeletal regulator | cytoskeletal organization | |
| rc_AA858520_g_at | Follistatin | 1.4 | 2.4 | 3.7 | 2.8 | regulatory; growth/proliferation;growth factor; TGF-beta; | secreted growth factor activity; SMAD; TGFbeta receptor signaling pathway | |
| rc_AA849769_g_at | Follistatin related protein precursor | -1.3 | -1.7 | -2.2 | -1.5 | regulatory; growth/proliferation;growth factor; TGF-beta; | secreted growth factor activity; SMAD; TGFbeta receptor signaling pathway | |
| rc_H31144_g_at | formin 2; EST (mouse) | 1.5 | 1.7 | 2.1 | 2.1 | cytoskeleton/sarcomere; structural | ||
| rc_AA891527_at | Four and a half LIM domains 2 (Slim3) | -5.9 | -3.5 | -3.7 | -4.6 | regulatory; adhesion | differentiation; NFKB; IGF; adhesion; LIM; myogenesis | |
| AJ005046_g_at | Fructose bisphosphatase 2, muscle | 1.2 | -1.0 | 2.0 | 6.4 | metabolism; carbohydrate; glycolytic | ||
| X15580complete_seq_s_at | fructose-2,6-bisphosphatase 1 | 2.5 | 3.8 | 3.7 | 5.3 | metabolism; carbohydrate; glycolytic | ||
| J04197_i_at | fructose-2,6-bisphosphatase 1 | 1.9 | 1.8 | 1.2 | 3.2 | metabolism; carbohydrate; glycolytic | ||
| L26292_g_at | FSH-regulated | 1.2 | -3.7 | -2.5 | -2.1 | regulatory; growth/proliferation; growth factor activity | ||
| M77694_at | Fumarylacetoacetate hydrolase | 2.0 | 1.7 | 2.0 | 2.1 | protein turnover; metabolism; protein; amino acid | ||
| AB016161cds_r_at | gamma-aminobutyric acid (GABA) B receptor, 1 | 1.2 | 1.5 | 2.4 | 1.5 | regulatory; signal transduction | adenylate cyclase activity; gamma-amino butyric acid signaling pathway; synaptic; metabotropic glutamate receptor signaling pathway | |
| AF080468_g_at | Glucose-6-phosphatase, transport protein 1 | 1.8 | 2.6 | 1.8 | 1.6 | metabolism; carbohydrate; glycolytic | ||
| AF080468_at | Glucose-6-phosphatase, transport protein 1 | 1.5 | 2.3 | 1.4 | 1.9 | metabolism; carbohydrate; glycolytic | ||
| S63521_i_at | Glucose-regulated protein GRP78 | -1.6 | -8.8 | -3.3 | -4.5 | protein turnover; protein folding | ||
| M90518_at | Glutamate receptor, metabotropic 4 | -1.4 | -1.6 | -2.3 | -1.0 | regulatory; signal transduction | cAMP responsive; G-protein coupled receptor protein signaling pathway; synaptic transmission; metabotropic glutamate, GABA-B-like receptor activity; negative regulation of adenylate cyclase activity | Group II and III receptors are linked to the inhibition of the cyclic AMP cascade but differ in their agonist selectivities |
| M91652complete_seq_g_at | Glutamine synthetase glutamate-ammonia ligase | 1.3 | 3.4 | 6.9 | 3.5 | protein turnover; metabolism; protein; amino acid | ||
| rc_AA852004_s_at | Glutamine synthetase glutamate-ammonia ligase | 1.1 | 3.4 | 7.2 | 3.7 | protein turnover; metabolism; protein; amino acid | ||
| M91652complete_seq_at | Glutamine synthetase glutamate-ammonia ligase | -1.1 | 4.2 | 9.6 | 4.4 | protein turnover; metabolism; protein; amino acid | ||
| rc_AI232783_s_at | Glutamine synthetase glutamate-ammonia ligase | 1.0 | 2.1 | 4.9 | 3.3 | protein turnover; metabolism; protein; amino acid | ||
| X07365_s_at | Glutathione peroxidase 1 | -1.4 | -4.0 | -3.9 | -2.0 | stress; oxidative/toxic | ||
| X12367cds_s_at | Glutathione peroxidase 1 | -1.3 | -3.0 | -3.5 | -1.9 | stress; oxidative/toxic | ||
| D00680_at | glutathione peroxidase precursor, plasma | 1.2 | 1.6 | 1.9 | 2.2 | stress; oxidative/toxic | ||
| E01415cds_s_at | Glutathione-S-transferase | 1.3 | 2.6 | 1.9 | 1.5 | stress; oxidative/toxic | ||
| rc_AA892234_at | Glutathione-S-transferase 3, EST (human) | -1.1 | -2.0 | -3.8 | -2.3 | stress; oxidative/toxic | ||
| U86635_at | Glutathione-S-transferase mu 5 | 1.6 | 2.7 | 3.0 | 2.8 | stress; oxidative/toxic | ||
| U86635_g_at | Glutathione-S-transferase mu 5 | 1.7 | 2.3 | 2.7 | 2.6 | stress; oxidative/toxic | ||
| K01932_f_at | Glutathione-S-transferase, alpha type (Ya) | 1.7 | 4.4 | 3.4 | 2.0 | stress; oxidative/toxic | ||
| X78848cds_f_at | Glutathione-S-transferase, alpha type (Ya) | 2.0 | 2.7 | 3.7 | 2.5 | stress; oxidative/toxic | ||
| S72505_f_at | Glutathione-S-transferase, alpha type (Ya) | 3.2 | 6.2 | 6.6 | 2.9 | stress; oxidative/toxic | ||
| J03914cds_s_at | glutathione-S-transferase, mu type 2 (Yb2) | 1.5 | 3.2 | 5.3 | 5.6 | stress; oxidative/toxic | ||
| X04229cds_s_at | glutathione-S-transferase, mu type 2 (Yb2) | 1.7 | 2.7 | 2.9 | 2.1 | stress; oxidative/toxic | ||
| J02592_s_at | glutathione-S-transferase, mu type 2 (Yb2) | -1.1 | 3.1 | 3.5 | 6.6 | stress; oxidative/toxic | ||
| H32189_s_at | glutathione-S-transferase, mu type 2 (Yb2) | 1.0 | 2.0 | 2.2 | 1.9 | stress; oxidative/toxic | ||
| U36772_at | Glycerol-3-phosphate acyltransferase | 1.3 | 1.6 | 2.3 | 1.5 | metabolism; lipid; thermogenesis | ||
| U36773_g_at | glycerol-3-phosphate acyltransferase, mitochondrial | 1.7 | 1.4 | 2.2 | -1.2 | metabolism; lipid; thermogenesis | ||
| X78593_at | glycerol-3-phosphate dehydrogenase 2 | 2.0 | 2.9 | 1.4 | 1.4 | metabolism; carbohydrate; glycolytic | ||
| U83880UTR#1_at | glycerol-3-phosphate dehydrogenase 2 | 1.6 | 2.0 | 5.0 | 4.9 | metabolism; carbohydrate; glycolytic | ||
| L10669_g_at | Glycogen phosphorylase muscle isozyme | 1.5 | 2.4 | 3.3 | 2.9 | metabolism; carbohydrate; glycogenolysis | ||
| L10669_at | Glycogen phosphorylase muscle isozyme | 1.4 | 2.2 | 2.9 | 2.6 | metabolism; carbohydrate; glycogenolysis | ||
| L10326_at | GNAS complex locus | -1.0 | 1.5 | 2.2 | 1.6 | regulatory; vesicle transport | GTP signaling; intracellular trafficking; adenylate cyclase activation | |
| U77829mRNA_i_at | growth arrest specific 5 | 1.5 | 2.1 | 1.5 | 1.2 | regulatory; growth/proliferation; proliferation; cell cycle arrest | cell cycle arrest; differentiation; development | |
| U77829mRNA_s_at | growth arrest specific 5 | 1.5 | 2.7 | 1.5 | -1.0 | regulatory; growth/proliferation; proliferation; cell cycle arrest | cell cycle arrest; differentiation; development | |
| AF076619_at | Growth factor receptor bound protein 14 | 1.3 | 2.0 | 1.8 | 1.4 | regulatory; growth/proliferation; growth factor activity | SH3; SH2; neuropeptide signaling pathway; secreted growth factor activity | |
| S49003_s_at | Growth hormone receptor, short isoform | -1.2 | 6.5 | 1.4 | 3.9 | regulatory; growth/proliferation; growth factor activity | secreted growth factor activity | |
| D13417_g_at | Hairy-related and enhancer of split 1 | 1.8 | 2.6 | 2.0 | 1.7 | regulatory; transcription | adhesion; development; Ebox; neurogenesis; Notch signaling; myogenesis | |
| D29960_at | Heat shock 20-kDa protein | -1.3 | -3.8 | -3.4 | -2.7 | protein turnover; protein folding | ||
| rc_AI103838_g_at | Heat shock 20-kDa protein | -1.5 | -4.4 | -3.3 | -2.6 | protein turnover; protein folding | ||
| M86389cds_s_at | Heat shock 27kD protein 1 | -2.1 | -1.3 | 1.2 | -1.9 | protein turnover; protein folding | ||
| AF077354_g_at | heat shock 70 kDa protein 4 | -1.2 | -1.9 | -1.9 | -2.3 | protein turnover; protein folding | ||
| M14050_s_at | heat shock 70kD protein 5 | -2.1 | -2.7 | -1.8 | -2.2 | protein turnover; protein folding | ||
| L16764_s_at | Heat shock protein 70 | -3.4 | -3.6 | -2.8 | -2.1 | protein turnover; protein folding | ||
| Z75029_s_at | Heat shock protein 70 | -5.0 | -3.2 | -1.9 | -1.3 | protein turnover; protein folding | ||
| Z27118cds_s_at | Heat shock protein 70 | -6.1 | -3.2 | -2.3 | -2.0 | protein turnover; protein folding | ||
| rc_AA818604_s_at | Heat shock protein 70 | -3.1 | -2.8 | -2.4 | -1.9 | protein turnover; protein folding | ||
| AA848563_s_at | Heat shock protein 70 | -4.0 | -5.6 | -12.8 | -7.4 | protein turnover; protein folding | ||
| rc_AI176546_at | Heat shock protein 90 beta | -3.0 | -2.1 | -2.3 | -2.8 | protein turnover; protein folding | ||
| AA108277_at | Heat shock protein E71, 5' similar to hsp-E7I | -1.7 | -2.2 | -1.9 | -2.7 | protein turnover; protein folding | ||
| rc_AA875531_s_at | Heat shock protein, 60 kDa | 1.1 | -1.3 | -1.9 | -2.1 | protein turnover; protein folding | ||
| S56464mRNA_at | Hexokinase II | -1.3 | -1.1 | 2.0 | 2.0 | metabolism; carbohydrate; glycolytic | ||
| D26393exon_s_at | Hexokinase II | -1.9 | 1.2 | 1.7 | 2.2 | metabolism; carbohydrate; glycolytic | ||
| rc_AI007857_at | HGF-regulated tyrosine kinase substrate (Hrs) | -1.2 | 2.0 | 2.0 | 1.4 | regulatory; growth/proliferation; proliferation; negative | intracellular trafficking; zinc ion binding activity; Src; endosome; negative regulation of cell proliferation; differentiation | |
| rc_AA892014_s_at | HLA-B associated transcript 1 (Bat1) | 1.4 | 1.3 | 1.8 | 2.2 | regulatory; mRNA processing | DEAD RNA helicase | |
| AB007689_at | homer, neuronal immediate early gene 2 | -1.1 | -3.1 | -4.8 | -5.3 | regulatory; signal transduction | metabotropic glutamate receptor signaling pathway; GKAP/Homer scaffold activity | |
| AB007690_s_at | homer, neuronal immediate early gene 2 | -1.4 | -3.2 | -8.6 | -13.7 | regulatory; signaling | metabotropic glutamate receptor signaling pathway; GKAP/Homer scaffold activity | |
| M65251_s_at | Human immunodeficiency virus type I enhancer-binding protein 2 | 1.2 | 1.6 | 2.0 | 2.1 | regulatory; transcription | metal ion binding activity | |
| X96437mRNA_g_at | immediate early response 3 (IEX-3 or Prg1) | 3.4 | 2.1 | 2.2 | 1.1 | regulatory; transcription | apoptosis inhibitor; cAMP responsive | This gene functions in the protection of cells from Fas- or tumor necrosis factor type alpha-induced apoptosis. |
| rc_AA799566_g_at | incisor protein | 1.7 | 6.2 | 3.7 | 3.3 | regulatory; transcription | DNA repair; stress or injury | |
| L23148_g_at | Inhibitor of DNA binding 1, helix-loop-helix protein (splice variation) | -1.6 | -2.9 | -2.1 | -2.6 | regulatory; transcription | SMAD; development; Ebox; myogenesis | |
| M31837_at | insulin-like growth factor binding protein 3 | 1.5 | 1.3 | 2.6 | 1.2 | regulatory; growth/proliferation; growth factor activity; | IGF; secreted growth factor activity; myogenesis | |
| M62781_at | Insulin-like growth factor-binding protein 5 | 3.7 | 3.0 | 8.4 | 4.1 | regulatory; growth/proliferation; growth factor activity | IGF; secreted growth factor activity; myogenesis | |
| rc_AI029920_s_at | Insulin-like growth factor-binding protein 5 | 4.7 | 2.8 | 6.0 | 4.3 | regulatory; growth/proliferation; growth factor activity; | IGF; secreted growth factor activity; myogenesis | |
| U69272_at | Interleukin 15 | 2.2 | 2.0 | 2.1 | 3.0 | regulatory; growth/proliferation; growth factor activity; positive | apoptosis; secreted growth factor activity; cytokine signaling; endosome; JAK-STAT | This cytokine induces the activation of JAK kinases, as well as the phosphorylation and activation of transcription activators STAT3, STAT5, and STAT6. |
| AF015719_s_at | Interleukin 15 | 3.8 | 1.9 | 1.4 | 1.6 | regulatory; growth/proliferation;proliferation; positive | apoptosis; secreted growth factor activity; cytokine signaling; endosome; JAK-STAT | This cytokine induces the activation of JAK kinases, as well as the phosphorylation and activation of transcription activators STAT3, STAT5, and STAT6. |
| rc_AI176621_at | iron-responsive element-binding protein | 2.0 | 2.7 | 2.5 | 1.9 | regulatory; mRNA processing | iron homeostasis; RNA stability | |
| rc_AA892314_at | Isocitrate dehydrogenase 1, soluble | 2.0 | 2.0 | 2.3 | 1.4 | metabolism; carbohydrate; glycolytic | ||
| U13396_g_at | Janus kinase 2 (a protein tyrosine kinase) | 2.3 | 3.1 | 2.1 | 1.2 | regulatory; signal transduction | JAK-STAT; cytokine signaling; negative regulation of cell proliferation; differentiation | |
| M19647_f_at | kallikrein 1 | 1.3 | 2.1 | 2.2 | -1.2 | protein turnover; proteolysis; protease | ||
| D12769_g_at | Kruppel-like factor 9 | 1.5 | 1.9 | 2.2 | 2.3 | regulatory; transcription | JNK | |
| M54926_at | Lactate dehydrogenase A | 1.0 | 1.3 | 1.8 | 2.7 | metabolism; carbohydrate; glycolytic | ||
| rc_AA859581_at | Late gestation lung protein | -1.1 | -2.2 | -1.6 | -1.2 | uknown | morphogenesis | |
| L03294_g_at | Lipoprotein lipase | -1.1 | -2.4 | -1.8 | -1.7 | metabolism; lipid; uptake and transport | ||
| L03294_at | Lipoprotein lipase | -1.1 | -2.3 | -1.8 | -1.7 | metabolism; lipid; uptake and transport | ||
| U97146_at | Lysophospholipase | 1.3 | 2.4 | 1.6 | 1.3 | regulatory; signal transduction | phosopholipase | Lysophospholipases are enzymes that act on biological membranes to regulate the multifunctional lysophospholipids. |
| AF004661_at | mannose-binding protein associated serine protease-1 | 1.3 | 1.7 | 2.5 | 3.4 | protein turnover; proteolysis; serine protease | ||
| D50564_at | Mercaptopyruvate sulfurtransferase | 1.5 | 2.5 | 2.3 | 1.9 | stress; oxidative/toxic | ||
| rc_AI169327_at | Metalloproteinase-1, tissue inhibitor of- | -1.2 | -2.2 | -1.4 | -2.3 | protein turnover; proteolysis; protease inhibitor | ||
| rc_AI169327_g_at | Metalloproteinase-1, tissue inhibitor of- | -1.3 | -12.2 | -4.2 | -12.4 | protein turnover; proteolysis; protease inhibitor | ||
| M93401_at | methylmalonate semialdehyde dehydrogenase gene | 1.5 | 1.8 | 2.1 | 1.7 | protein turnover; metabolism; protein; amino acid | ||
| AF095741_g_at | Mg87 protein | 1.4 | 2.0 | 1.6 | 1.8 | unknown | ||
| X14254cds_at | MHC class II-associated invariant chain | 2.5 | 2.6 | 9.3 | 7.1 | stress; immune; antigen | ||
| X14254cds_g_at | MHC class II-associated invariant chain | 1.1 | 1.5 | 5.4 | 2.6 | stress; immune; antigen | ||
| rc_AA957930_s_at | Microtubule-associated protein tau | -1.0 | -1.4 | -1.7 | -2.1 | cytoskeleton/sarcomere; structural | ||
| rc_AI227608_s_at | Microtubule-associated protein tau | -1.1 | -1.8 | -2.9 | -5.7 | cytoskeleton/sarcomere; structural | ||
| X79321_at | Microtubule-associated protein tau | -1.0 | -1.4 | -1.7 | -2.6 | cytoskeleton/sarcomere; structural | ||
| rc_AA799508_at | Microtubule-associated proteins 1A/1B light chain 3 | 1.2 | 1.6 | 1.5 | 2.1 | cytoskeleton/sarcomere; structural | ||
| U05784_s_at | Microtubule-associated proteins 1A/1B light chain 3 | 1.1 | 2.3 | 3.2 | 1.5 | cytoskeleton/sarcomere; structural | ||
| Y09333_at | Mitochondrial acyl-CoA thioesterase 1 | 1.1 | -1.9 | -1.5 | -2.1 | metabolism; lipid; FA oxidation | ||
| rc_AA892400_at | mitochondrial CCA-adding tRNA-nucleotidyltransferase, ESTs (human) | 1.9 | 2.2 | 3.3 | 2.1 | unknown | ||
| U48596_g_at | Mitogen activated protein kinase kinase kinase 1; Map3k1 | 2.3 | 1.6 | 1.4 | 1.5 | regulatory; signal transduction | MAPK; MEK; JNK; ERK; p38; apoptosis; cytokine signaling | |
| rc_AI011376_at | Mitogen-activated protein kinase kinase 2, EST (mouse) | 2.3 | 2.6 | 2.8 | 1.7 | regulatory; signal transduction | MAPK; MEK; JNK; ERK; p38; apoptosis; cytokine signaling | |
| rc_AA955477_g_at | Mitogen-activated protein kinase kinase 2, EST (mouse) | 1.4 | 2.3 | 2.3 | 1.9 | regulatory; signal transduction | MAPK; MEK; JNK; ERK; p38; apoptosis; cytokine signaling | |
| rc_AA925300_at | Mitogen-activated protein kinase kinase kinase 3 | 1.2 | 1.1 | 2.1 | 1.1 | regulatory; signal transduction | MAPK; MEK; JNK; ERK; p38; apoptosis; cytokine signaling | |
| U87627_at | Monocarboxylate transporter | 1.4 | 1.8 | 1.8 | 3.4 | metabolism; carbohydrate; glycolytic | ||
| X90642mRNA_at | Multidrug resistance protein (ID:1) | 4.5 | 5.2 | 3.7 | 5.6 | unknown | ||
| X81193_at | Muscle LIM protein; cysteine-rich protein | -2.3 | -3.7 | -2.1 | -1.9 | regulatory; cytoskeletal regulator | development; differentiation; myogenesis; LIM | |
| rc_AA851223_at | Muscle specific enolase (beta beta enolose) | 1.1 | 1.8 | 2.0 | 4.1 | metabolism; carbohydrate; glycolytic | ||
| K00512_at | Myelin basic protein | 1.2 | 1.2 | 1.9 | 2.3 | regulatory; PI3k | development; Pi3K; neurogenesis | |
| AB019393_at | myocilin | 2.4 | 2.0 | 1.3 | 1.7 | regulatory; cytoskeletal regulator | cytoskeletal organization | |
| M84176_at | Myogenic regulatory factor D | 3.4 | 3.5 | 5.8 | 3.0 | regulatory; transcription | development; differentiation; myogenesis | |
| S68736_at | Myosin heavy chain 2D/2X | -1.6 | 30.0 | 6.3 | 59.4 | contraction; fast; cytoskeleton/sarcomere | ||
| X04267_at | myosin heavy chain 3 | -1.5 | -3.0 | -6.5 | -4.5 | contraction; embryonic; cytoskeleton/sarcomere | ||
| K03468_s_at | myosin heavy chain 3 | -1.2 | -2.6 | -4.9 | -3.7 | contraction; embryonic; cytoskeleton/sarcomere | ||
| L24897_s_at | Myosin heavy chain IIx/d | 4.0 | 25.6 | 120.7 | 188.3 | contraction; fast; cytoskeleton/sarcomere | ||
| M12098_s_at | Myosin heavy chain, embryonic | -1.4 | -4.5 | -21.8 | -16.1 | contraction; embryonic; cytoskeleton/sarcomere | ||
| K03467_s_at | Myosin heavy chain, embryonic | -1.5 | -3.2 | -19.4 | -16.2 | contraction; embryonic; cytoskeleton/sarcomere | ||
| X00975_at | Myosin light chain 2, fast | -1.1 | 1.6 | 1.4 | 4.8 | contraction; fast; cytoskeleton/sarcomere | ||
| X00975_g_at | Myosin light chain 2, fast | -1.2 | 1.6 | 1.4 | 5.5 | contraction; fast; cytoskeleton/sarcomere | ||
| M11851_at | Myosin light chain 2, slow | -1.3 | -6.2 | -23.1 | -10.4 | contraction; slow; cytoskeleton/sarcomere | ||
| X07314cds_at | Myosin light chain 2, slow | -1.2 | -5.3 | -61.3 | -12.6 | contraction; slow; cytoskeleton/sarcomere | ||
| X07314cds_g_at | Myosin light chain 2, slow | -1.3 | -5.3 | -36.1 | -7.2 | contraction; slow; cytoskeleton/sarcomere | ||
| J03886_at | Myosin light chain kinase 2, skeletal muscle | 1.4 | 1.6 | 2.1 | 1.9 | regulatory; cytoskeletal regulator | adhesion; cytoskeletal organization; calcium signaling | |
| X05566_i_at | Myosin light chain RLC | -1.4 | -4.5 | -3.7 | -2.8 | contraction; slow; cytoskeleton/sarcomere | ||
| X54617mRNA_s_at | myosin regulatory light chain, exon 4 | -1.4 | -3.7 | -3.2 | -2.2 | contraction; slow; cytoskeleton/sarcomere | ||
| U04937_s_at | Na-Ca exchanger; sodium-calcium exchanger | -1.6 | -2.8 | -6.0 | -2.9 | contraction; slow; membrane depolarization | ||
| X87157_at | Neurolysin (metallopeptidase M3 family) | 1.4 | 1.6 | 2.3 | 2.3 | protein turnover; proteolysis; protease; | ||
| S72637_s_at | NO3; tumor-suppressive gene | 1.2 | 1.4 | 1.9 | 2.1 | regulatory; growth/proliferation; proliferation; oncogenesis/tumor supressor | tumor supressor; cell cycle arrest | |
| rc_AA799539_at | NS1-binding protein, EST (human) | 2.8 | 2.4 | 3.1 | 2.4 | protein turnover; translation; mRNA processing | ||
| rc_AA891864_at | Nuclear ATP/GTP-binding protein, EST (mouse) | 1.4 | 1.9 | 3.5 | 3.4 | regulatory; signal transduction | differnetiation; Purkinje cell degeneration; carboxypeptidase; regeneration | NNA1 is a zinc carboxypeptidase that contains nuclear localization signals and an ATP/GTP-binding motif; Nna1 may contribute to nuclear signaling events in differentiating and regenerating neurons |
| X13167cds_s_at | Nuclear Factor IA (Nfia) | 1.6 | 2.2 | 1.4 | -1.1 | regulatory; transcription | translation regulator activity; cytokine signaling; Y-box binding protein | |
| U20796_at | nuclear receptor subfamily 1, group D, member 2 | 1.6 | 2.1 | 1.4 | 1.7 | regulatory; transcription | ligand-dependent nuclear receptor signaling; Rev-ErbA; differentiation; development | In summary, HZF-2 alpha/beta are novel orphan nuclear receptors which may play an important role in hormone-dependent aspects of developmental processes modulating hippocampal and cerebellar plasticity |
| rc_AI176710_at | nuclear receptor subfamily 4, group A, member 3 | -1.6 | -1.3 | -1.4 | -3.1 | regulatory; transcription | ligand-dependent nuclear receptor signaling; steroid hormone receptor activity; NGFI-B | A cDNA clone of NOR-1 encodes a 68kDa, 628 amino acid residue-containing protein, with an amino acid sequence highly homologous to the Nur77 family in its DNA-binding domain and moderately so in its putative ligand-binding domain. Using mobility shift ass |
| AF062594_g_at | nucleosome assembly protein 1-like 1 | 1.2 | 1.6 | 2.2 | 1.1 | regulatory; growth/proliferation; proliferation; cell cycle; positive | positive regulation of cell proliferation | This protein participates in DNA replication and may play a role in modulating chromatin formation and contribute to the regulation of cell proliferation. |
| U17254_at | Nur77; Immediate early gene transcription factor NGFI-B | -2.4 | -1.4 | 2.4 | 1.4 | regulatory; transcription | ligand-dependent nuclear receptor signaling; NGFI-B | |
| rc_AA893325_at | ornithine aminotransferase | 1.0 | 2.8 | 1.2 | 1.0 | protein turnover; metabolism; protein; amino acid | ||
| J04791_s_at | ornitine decarboxylase | -3.9 | -1.6 | -2.3 | -2.0 | protein turnover; metabolism; protein; amino acid | ||
| J04792_at | ornitine decarboxylase | -2.0 | -2.0 | -2.2 | -2.3 | protein turnover; metabolism; protein; amino acid | ||
| rc_AI175539_at | Parvalbumin | 1.3 | 3.1 | 5.7 | 5.6 | contraction; membrane depolarization | ||
| X62951mRNA_s_at | pBUS19 with repetitive elements | 1.6 | 2.5 | 1.9 | 1.8 | unknown | ||
| U23769_at | PDZ and LIM domain 1 (elfin) | -1.9 | -3.1 | -4.9 | -3.0 | stress; oxidative/toxic | ||
| E03344cds_s_at | Peroxisomal membrane protein 3 | 2.1 | 1.8 | 2.2 | 1.5 | regulatory; signal transduction | peroxisome organization and biogenesis | |
| S56508_s_at | Phosphatidylinositol 4-kinase | 3.9 | 4.9 | 6.2 | 4.3 | metabolism; lipid biosynthesis | ||
| U25651_at | Phosphofructokinase, muscle | 1.4 | 1.9 | 2.0 | 2.4 | metabolism; carbohydrate; glycolytic | ||
| U20195_s_at | Phosphoglucomutase 1 | 1.5 | 1.7 | 2.1 | 2.0 | metabolism; carbohydrate; glycogenolysis | ||
| rc_AA894296_at | Phosphoglucomutase 1 | 1.2 | 1.7 | 2.2 | 1.6 | metabolism; carbohydrate; glycogenolysis | ||
| L11694_at | Phosphoglucomutase 1 | 1.5 | 1.7 | 2.4 | 2.1 | metabolism; carbohydrate; glycogenolysis | ||
| S63233_g_at | Phosphoglycerate mutase 1 type B | -1.8 | -2.1 | -2.2 | -2.3 | metabolism; carbohydrate; glycolytic | ||
| X51529_at | Phospholipase A2, group IIA | 2.3 | 1.3 | 1.3 | 1.9 | regulatory; growth/proliferation; proliferation; oncogenesis/tumor supressor | tumor suppressor; oncogenesis; calcium signaling; stress or injury | |
| M20637_s_at | Phospholipase C, delta 1 | 1.3 | 2.2 | 2.3 | 2.1 | regulatory; signal transduction | calcium signaling | |
| U16655_at | Phospholipase C, delta 4 | 2.0 | 2.8 | 1.8 | 1.9 | regulatory; signal transduction | calcium signaling | |
| M98826mRNA_g_at | Phosphorylase kinase, gamma | 1.1 | 2.5 | 2.9 | 3.8 | metabolism; carbohydrate; glycogenolysis | ||
| X07320_at | Phosphorylase kinase, gamma 1 | 1.2 | 2.0 | 2.5 | 2.9 | metabolism; carbohydrate; glycogenolysis | ||
| rc_AI639151_at | pinin, ESTs (mouse) | 1.9 | 1.1 | 2.2 | 1.4 | cytoskeleton/sarcomere; structural | ||
| rc_AA891842_at | Podocalyxin precursor | 1.9 | 1.2 | 1.1 | 3.6 | unknown | ||
| X62841mRNA_at | potassium channel protein (2858 bp) | 1.5 | 2.4 | 2.0 | 2.8 | contraction; unclassified; membrane depolarization | ||
| X78461_at | potassium inwardly-rectifying channel, subfamily J, member 12 | -1.3 | 3.7 | 2.8 | 2.2 | contraction; unclassified; membrane depolarization | ||
| U61729_at | proline rich 2 | 1.3 | 1.6 | 2.4 | 1.5 | protein turnover; proteolysis; ubiquitination | ||
| L17318_at | proline-rich proteoglycan 2 | 1.2 | 1.5 | 1.0 | 2.8 | regulatory; growth/proliferation; ECM | ||
| D16443_g_at | Prostaglandin E receptor 3 ( subtype EP3) | -1.0 | 1.0 | -1.1 | 2.1 | regulatory; growth/proliferation; growth factor activity; | cAMP responsive; GTP signaling; thermogenesis | |
| D50694_at | Proteasome (prosome, macropain) 26S subunit, ATPase | 1.0 | 2.1 | 1.7 | 1.1 | protein turnover; proteolysis; protease; proteasome subunit; | ||
| U77918_at | Proteasome 26S subunit, ATPase 3 | 1.0 | 2.2 | 1.8 | 1.1 | protein turnover; proteolysis; protease; proteasome subunit; | ||
| D50695_at | Proteasome 26S subunit, ATPase 4 (Tat-binding protein) | 1.1 | 2.5 | 1.8 | 1.1 | protein turnover; proteolysis; protease; proteasome subunit; | ||
| AB000491_at | Proteasome 26S subunit, ATPase 5 (SUG1) | 1.1 | 2.3 | 2.0 | 1.7 | protein turnover; proteolysis; protease; proteasome subunit; | ||
| AJ006340_s_at | Proteasome 26S subunit, p112 | 1.2 | 2.7 | 2.6 | 1.7 | protein turnover; proteolysis; protease; proteasome subunit; | ||
| X55986mRNA_s_at | Proteasome subunit, alpha 4 | 1.1 | 2.2 | 1.7 | -1.2 | protein turnover; proteolysis; protease; proteasome subunit; | ||
| L17127_g_at | Proteasome subunit, beta 4 (RN3) | 1.4 | 2.4 | 1.3 | 1.3 | protein turnover; proteolysis; protease; proteasome subunit; | ||
| rc_AI172162_at | Proteasome subunit, beta 4 (RN3) | 1.1 | 2.2 | 1.5 | 1.1 | protein turnover; proteolysis; protease; proteasome subunit; | ||
| U13895_s_at | Proteasome subunit, MSS1 | 1.2 | 2.6 | 2.1 | 1.1 | protein turnover; proteolysis; protease; proteasome subunit; | ||
| D26180_at | protein kinase C-like 1 | 1.0 | 2.2 | 2.4 | 1.7 | regulatory; signal transduction | activation of JUN kinase | |
| X89225cds_s_at | Protein linked to system L-like neutral amino acid transport activity | -1.2 | -1.4 | -1.3 | -2.1 | protein turnover; metabolism; protein; amino acid | ||
| rc_AA799980_at | Protein phosphatase 1B (2C), magnesium-dependent, beta isoform | -1.9 | -2.1 | -1.2 | -1.7 | regulatory; growth/proliferation; proliferation; oncogenesis/tumor supressor | differentiation | The mRNA level of type 2C protein phosphatase was enhanced in accordance with the differentiation of the C3H10T1/2 cells into myoblasts induced by the transfection of MyoD cDNA. These results suggest that type 2C protein phosphatase is related to the mech |
| rc_AI012595_at | Protein phosphatase 2 (2A), catalytic subunit, alpha isoform | -2.1 | -2.5 | -1.9 | -1.7 | regulatory; signal transduction | differentiation; insulin | Protein phosphatase 2A (PP2A) acts on a number of enzymes involved in the insulin regulation of glucose uptake and glycogen synthesis |
| X16043cds_at | protein phosphatase 2A catalytic subunit isotype alpha | -1.7 | -2.0 | -1.6 | -1.9 | regulatory; signal transduction | differentiation; insulin | Protein phosphatase 2A (PP2A) acts on a number of enzymes involved in the insulin regulation of glucose uptake and glycogen synthesis |
| S90449_at | protein phosphatase 2C | -1.5 | -1.6 | -1.1 | -2.1 | regulatory; signal transduction | ||
| L19933_s_at | Protein tyrosine phosphatase, receptor type, D | 1.2 | 1.5 | 1.9 | 2.4 | regulatory; proliferation; oncogenesis/tumor supressor; | transmembrane receptor; neurogenesis; differentiation; oncogenesis; adhesion | |
| L19180_g_at | Protein tyrosine phosphatase, receptor type, D | 1.9 | 4.5 | 8.8 | 4.3 | regulatory; growth/proliferation; proliferation; oncogenesis/tumor supressor | transmembrane receptor; neurogenesis; differentiation; oncogenesis; adhesion | |
| rc_AA800844_s_at | Protein-lysine 6-oxidase | -1.3 | -1.7 | -2.1 | -2.3 | ECM structrual/regulator | ||
| rc_AA893235_at | Putative lymphocyte G0/G1 switch protein 2, EST (mouse) | 5.6 | 2.2 | 1.6 | 2.2 | regulatory; growth/proliferation; proliferation; cell cycle | cell cycle; G0/G1 switch | Genes actively involved in the G0/G1 switch (G0S genes) may be differentially expressed during the lectin-induced switch of lymphocytes from the G0 to the G1 phases of the cell cycle |
| X59993_at | Putative zinc finger protein | 2.0 | 1.4 | 2.3 | 2.8 | regulatory; transcription factor | ||
| U32314_at | Pyruvate carboxylase | 1.4 | 1.4 | 2.3 | 1.5 | metabolism; carbohydrate; glycolytic | ||
| U10357_at | pyruvate dehydrogenase kinase 2 | 1.4 | 2.0 | 2.1 | 1.5 | metabolism; carbohydrate; glycolytic | ||
| AF034577_at | Pyruvate dehydrogenase kinase, isoenzyme 4 | -2.4 | -3.2 | -1.1 | -1.5 | metabolism; carbohydrate; glycolytic | ||
| AF062740_g_at | Pyruvate dehydrogenase phosphatase isoenzyme 1 | 4.3 | 8.8 | 3.8 | 2.7 | metabolism; carbohydrate; glycolytic | ||
| AF062740_at | Pyruvate dehydrogenase phosphatase isoenzyme 1 | 2.1 | 2.2 | 2.0 | 1.6 | metabolism; carbohydrate; glycolytic | ||
| rc_AA818951_at | Pyruvate kinase 3 | 1.1 | 1.6 | 2.3 | 3.0 | metabolism; carbohydrate; glycolytic | ||
| D01046_at | Rab11b, member RAS oncogene family | 1.4 | 1.4 | 2.7 | 2.0 | regulatory; signal transduction | intracellular trafficking; GTP signaling; Ras | |
| U12187_at | Ras-related associated with diabetes | -5.0 | -2.0 | -2.6 | -2.1 | regulatory; signal transduction | GTP signaling | |
| M10934_s_at | Retinol-binding protein (RBP) | 1.7 | 1.8 | 1.1 | 2.2 | unknown | carrier protein involved in the transport of retinol (vitamin A alcohol) from the liver storage site to peripheral tissue. Vitamin A is a fat-soluble vitamin necessary for growth, reproduction, differentiation of epithelial tissues, and vision | |
| rc_AI175486_at | Ribosomal protein S7 | -1.1 | 1.7 | 1.7 | 2.2 | protein turnover; translation; ribosomal protein | ||
| U25746_at | RNA helicase with arginine-serine-rich domain | 1.5 | 2.1 | 1.1 | 1.4 | protein turnover; translation; mRNA processing | ||
| U25746_g_at | RNA helicase with arginine-serine-rich domain | 1.3 | 2.1 | 1.8 | 1.4 | protein turnover; translation; mRNA processing | ||
| rc_AI228548_at | S-100 protein, alpha chain | 1.6 | 1.3 | 1.3 | 2.0 | regulatory;adhesion | calcium signaling; cel cycle; differnetiation; PKC; cytoskeleton | This protein may function in stimulation of Ca2+-induced Ca2+ release, inhibition of microtubule assembly, and inhibition of protein kinase C-mediated phosphorylation. Reduced expression of this protein has been implicated in cardiomyopathies. |
| M14656_at | Secreted phosphoprotein 1 | -1.6 | -2.5 | -1.2 | -2.2 | regulatory; growth/proliferation; ECM | ||
| rc_AI230247_s_at | Selenoprotein P, plasma, 1 | 1.4 | 2.2 | 1.5 | 1.4 | stress; oxidative/toxic | ||
| M69246_at | Serine (or cysteine) proteinase inhibitor, clade H, member 1; Collagen binding protein | -1.9 | -2.0 | -2.0 | -1.5 | protein turnover; proteolysis; protease inhibitor | ||
| rc_AA799791_at | serine/threonine kinase 25, ESTs (yeast) | 1.4 | 1.4 | 2.6 | -1.4 | regulatory; signal transduction | cAMP responsive; PKC; oxidative stress | |
| Y07534cds_s_at | Serpin; Serine protease inhibitor; mitochondrial cytochrome P450 | 3.8 | 14.4 | 15.5 | 6.6 | protein turnover; proteolysis; protease inhibitor | ||
| M38566mRNA_s_at | Serpin; Serine protease inhibitor; mitochondrial cytochrome P450 | 2.4 | 7.3 | 8.1 | 3.4 | protein turnover; proteolysis; protease inhibitor | ||
| U25281_at | SH3 domain binding protein CR16 | 2.0 | 1.7 | 2.3 | 5.5 | regulatory; signal transduction | SH3; cytoskeletal organization | |
| X91988_at | Signal transducer and activator of transcription 5b | 1.6 | 1.6 | 2.6 | 1.5 | regulatory; transcription | cytokine signaling; JAK-STAT | |
| X62950mRNA_f_at | similar to protease [Sus scrofa] | 2.5 | 2.1 | 1.3 | 1.4 | protein turnover; proteolysis | ||
| D37934_g_at | Sirtuin 2 (silent mating type information regulation 2, homolog) 2 | 1.1 | 2.8 | 1.5 | 1.3 | regulatory; transcription | chromatin silencing | yeast sirtuin proteins are known to regulate epigenetic gene silencing and suppress recombination of rDNA. Studies suggest that the human sirtuins may function as intracellular regulatory proteins with mono-ADP-ribosyltransferase activity. |
| S82383_s_at | slow-twitch alpha TM/hTMnm homolog | -1.9 | -1.5 | -1.8 | -2.1 | contraction; slow; cytoskeleton/sarcomere | ||
| rc_AA891969_at | Small Unique Nuclear hormone receptor CoRepressor (C1D) | 1.4 | 2.0 | 1.7 | 1.6 | regulatory; transcription | myogenesis; differentiation; ligand-dependent nuclear receptor signaling | We conclude that SUN-CoR is a corepressor and may function as an additional component of the complex involved in transcriptional repression by unliganded and orphan nuclear hormone receptors. |
| M22253_at | Sodium channel, voltage-gated, type 1, alpha polypeptide | -4.8 | -1.2 | -9.3 | -1.0 | ion transport; sodium/potassium | ||
| AF051561_s_at | Solute carrier family 12, member 2 | 2.3 | 2.3 | 1.2 | 1.4 | ion transport; sodium/chloride-potassium/chloride | ||
| L19931_at | Solute carrier family 20, member 2 | 1.5 | 1.6 | 2.5 | 1.6 | ion transport; sodium/phosphate symporter | ||
| AB015433_s_at | solute carrier family 3, member 2 | -1.4 | -2.0 | -1.9 | -3.4 | protein turnover; metabolism; protein; amino acid | ||
| U50927_at | Solute carrier family 30 (zinc transporter), member 2 | 1.1 | 2.0 | 2.7 | 1.1 | regulatory; vesicle transport | endosome; synaptic; zinc binding activity | |
| J05167_at | Solute carrier family 4 member 3 anion exchange protein 3; Cl-/HCO3- exchanger (B3RP3) | 1.0 | -2.7 | -3.1 | -2.7 | ion transport; sodium/phosphate symporter | ||
| J05166_g_at | Solute carrier family 4, member 2 | 1.9 | 1.5 | 2.6 | 1.4 | ion transport | inorganic anion exchanger activity; pH regulation; oxidative stress | |
| rc_AI237576_s_at | SPA-1 like protein p1294 | 1.1 | 1.6 | -2.6 | -1.3 | regulatory; signal transduction | cytoskeletal organization; NMDA; GTPase activating | |
| L13635_s_at | Splicing factor, arginine/serine-rich 5 | 1.8 | 1.6 | 2.2 | 1.9 | protein turnover; translation; mRNA processing | ||
| AB014722_at | squamous cell carcinoma antigen recognized by T-cells 1 | 2.0 | 1.3 | 1.4 | 1.8 | regulatory; growth/proliferation; proliferation; oncogenesis/tumor supressor | oncogenesis; tumor supressor | |
| J02585_at | Stearoyl-Coenzyme A desaturase 1 | 3.3 | 5.8 | 2.0 | 6.9 | metabolism; lipid; FA oxidation | ||
| rc_AI230712_at | Subtilisin - like endoprotease | 1.3 | 1.2 | 1.3 | 2.1 | protein turnover; proteolysis; protease | ||
| AF065161_at | Suppressor of cytokine signaling (SOCS-1) (Cish1) | 3.0 | 1.3 | 1.9 | 1.6 | regulatory; signal transduction | cytokine signaling; JAK-STAT; MAPK; IGF; apoptosis | The protein encoded by this gene is found to interact with the cytoplasmic domain of insulin-like growth factor-1 receptor (IGF1R), and thus is thought to be involved in the regulation of IGF1R mediated cell signaling |
| AF075382_at | Suppressor of cytokine signaling-2 (SOCS-2) (Cish2) | 2.3 | 7.5 | 1.6 | 1.7 | regulatory; signal transduction | cytokine signaling; JAK-STAT; MAPK; IGF; apoptosis | The protein encoded by this gene is found to interact with the cytoplasmic domain of insulin-like growth factor-1 receptor (IGF1R), and thus is thought to be involved in the regulation of IGF1R mediated cell signaling |
| rc_AI639484_at | Synaptic vesicle glycoprotein 2b | 10.8 | 3.2 | 1.2 | 2.6 | regulatory; vesicle transport | development | |
| S45663_at | Synaptic vesicle glycoprotein Sc2 | 1.2 | -1.5 | -2.1 | -1.8 | regulatory; growth/proliferation; growth factor | development; synaptic | |
| S61868_g_at | Syndecan-4 | -2.2 | -1.6 | -1.2 | -1.3 | regulatory; adhesion | adhesion | |
| X86789_at | synuclein, gamma | 1.3 | 1.8 | 2.8 | 5.5 | regulatory; growth/proliferation; proliferation; oncogenesis/tumor supressor | oncogenesis | |
| D89730_at | T16 | 1.7 | 2.2 | 1.8 | 1.9 | unknown | ||
| rc_AA800962_at | Talin; ESTs (mouse) | -1.2 | -3.9 | -1.3 | -1.3 | regulatory; adhesion | adhesion | |
| U89282_at | Telomerase protein component 1 | 1.4 | 1.8 | 2.1 | 1.6 | regulatory; transcription | chromatin | |
| X15705cds_at | Testis-specific heat shock protein-related gene hst70 | -2.1 | -2.3 | -2.5 | -1.7 | protein turnover; protein folding | ||
| rc_AI172476_at | TGF-B inducible early growth response | 1.8 | 2.5 | 2.8 | 1.9 | regulatory; transcription | SMAD; TGFbeta receptor signaling pathway | TIEG amplies Smad signaling. |
| rc_AI014169_at | Thioredoxin interacting factor; Vdup1 upregulated by 1,25-dihydroxyvitamin D-3 | 1.6 | 2.4 | 1.7 | 1.5 | stress; oxidative/toxic | ||
| rc_AI237654_at | Thioredoxin interacting factor; Vdup1 upregulated by 1,25-dihydroxyvitamin D-3 | 1.6 | 2.1 | 2.2 | 1.8 | stress; oxidative/toxic | ||
| X56228_at | Thiosulfate sulphurtransferase (rhodanese) | 1.5 | 2.0 | 3.2 | 2.0 | stress; oxidative/toxic | ||
| X56228_g_at | Thiosulfate sulphurtransferase (rhodanese) | 4.3 | 6.9 | 7.4 | 3.4 | stress; oxidative/toxic | ||
| K01934mRNA#2_at | Thrsp, thyroid hormone responsive SPOT14 homolog (Rattus) | 2.1 | 4.3 | 1.1 | 8.2 | regulatory; signal transduction | possible involvement in human lipid disorders; Identification of genes enhanced by protein-calorie malnutrition | |
| L14463_at | Transducin-like enhancer of split 4 (E(sp1) homolog; EST (rat) | 1.4 | 1.3 | 2.4 | 1.3 | regulatory; transcription | development; differentiation; Notch signaling; myogenesis | |
| rc_AA875084_at | Transducin-like enhancer of split 4 (E(sp1) homolog; EST (rat) | 2.4 | 3.0 | 3.6 | 3.2 | regulatory; transcription | development; differentiation; Notch signaling; myogenesis | |
| M58040_at | Transferrin receptor | 3.0 | -1.7 | -1.8 | -1.7 | stress; oxidative/toxic | ||
| M83107_at | Transgelin, SM22 alpha | -3.7 | -4.3 | -2.5 | -1.7 | regulatory; cytoskeletal regulator | cytoskeletal organization | |
| M83107_g_at | Transgelin, SM22 alpha | -2.2 | -2.8 | -1.6 | -1.7 | regulatory; cytoskeletal regulator | cytoskeletal organization | |
| Y13275_at | Transmembrane 4 superfamily member; tetraspanin | 1.1 | 1.2 | 4.5 | 5.1 | regulatory; signal transduction | adhesion | |
| AB006914_at | Trip 10, thyroid hormone receptor interactor 10 | 1.3 | 1.5 | 2.1 | 1.7 | regulatory; cytoskeletal regulator | cytoskeletal organization; SH3 | |
| M15474cds_s_at | Tropomyosin 1 (alpha) | 1.2 | 2.4 | 1.8 | 9.7 | contraction; fast; cytoskeleton/sarcomere | ||
| M34134_s_at | Tropomyosin 1 (alpha) | 1.1 | 2.2 | 1.8 | 6.4 | contraction; fast; cytoskeleton/sarcomere | ||
| X02412_at | Tropomyosin 3 alpha | -1.1 | 1.1 | 1.5 | 5.3 | contraction; unclassified; cytoskeleton/sarcomere | ||
| rc_AA799680_at | tropomyosin, alpha-; EST (rat) | 1.7 | 1.9 | 1.9 | 2.3 | contraction; fast; cytoskeleton/sarcomere | ||
| rc_AI639532_at | Troponin C, fast skeletal EST (mouse) | 1.0 | 2.1 | 2.4 | 9.5 | contraction; fast; cytoskeleton/sarcomere | ||
| M73701_at | Troponin I, skeletal, fast 2 | 1.0 | 2.7 | 1.8 | 12.9 | contraction; fast; cytoskeleton/sarcomere | ||
| J04993_at | Troponin I, skeletal, slow 1 | -1.2 | -2.4 | -2.4 | -2.2 | contraction; slow; cytoskeleton/sarcomere | ||
| rc_AI136540_at | Troponin T, fast skeletal | -1.0 | 2.5 | 1.7 | 8.6 | contraction; fast; cytoskeleton/sarcomere | ||
| rc_AA800948_at | Tubulin alpha-1 chain; EST (rat) | -3.1 | -4.3 | -4.9 | -1.0 | cytoskeleton/sarcomere; structural | ||
| rc_AA799591_at | Tubulin, beta-, EST (rat) | -2.0 | -2.3 | -1.6 | -1.2 | cytoskeleton/sarcomere; structural | ||
| rc_AA799641_g_at | tumor differentially expressed 1, ESTs (mouse) | 1.4 | 1.7 | 1.1 | 2.5 | unknown | ||
| D17296_at | Ubiquitin C | 2.0 | 2.1 | 2.4 | 1.5 | protein turnover; proteolysis; ubiquitination | ||
| rc_AI639312_at | Ubiquitin-protein ligase E3 (Atrogin1) | 1.9 | 2.0 | 3.0 | 1.8 | protein turnover; proteolysis; ubiquitination | ||
| U50842_at | Ubiquitin-protein ligase E3 (Nedd4) | 2.2 | 2.5 | 2.9 | 1.7 | protein turnover; proteolysis; ubiquitination | ||
| AF035943_at | Uncoupling protein 3, mitochondrial | 1.4 | -1.1 | 2.6 | 1.2 | ion transport; hydrogen | ||
| U58858_at | unction plakoglobin | 1.7 | 1.6 | 1.9 | 2.1 | regulatory; cytoskeletal regulator | cytoskeletal organization | |
| X84997mRNA#5_at | Variable coding sequence A1 | -2.0 | -5.9 | -1.5 | -2.5 | unknown | ||
| M32167_g_at | Vascular endothelial growth factor-A188 | -1.4 | -2.3 | -1.6 | -1.7 | regulatory; growth/proliferation; growth factor activity; positive | positive regulation of cell proliferation | |
| U96490_at | Yip1p-interacting factor | -1.1 | -2.7 | -1.5 | -1.3 | regulatory; signal transduction | GTP signaling; intracellular trafficking |