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Microarray Experiment - Global analysis of gene expression patterns during disuse atrophy in rat skeletal muscle
Gene expression analysis of rat soleus muscles using Affymetrix GeneChips after 1, 4, 7 and 14 days of hindlimb unloading. Of the 8,799 probe sets on the U34A GeneChip, 426 were significantly changed by at least 2-fold with hindlimb unloading.
The following table is ordered by function.
probe_id - Affymetrix probe set ID (based on the GenBank accession sequence the probe set was developed from)
k_cluster - Cluster each gene was associated with after using a k-means clustering algorithm to divide genes into groups based on similarity in expression over the timecourse of unloading.
day01-day14 - Fold change at each time point calcualted as described.
function - The functional categories used were derived from Silicon Genetics and NCBI annotation records. Annotations were obtained for each gene from LocusLink and Unigene based on the GenBank sequences from which probes were derived. In the cases where rat functional information was incomplete, function was inferred based on curated homologs in mouse and/or human (HomoloGene).
possible_pathways - Notes based on the literature and functional annotations as to involvment in signaling pathways or cellular mechanisms.
| Probe_ID | gene_name | day1 | day4 | day7 | day14 | function | possible_pathways | notes |
| X80130cds_f_at | Actin, alpha- (cardiac) | -1.5 | -2.2 | -1.3 | -1.0 | contraction; embryonic; cytoskeleton/sarcomere | ||
| rc_AA866452_s_at | Actin, alpha- (cardiac) | -2.0 | -3.1 | -1.2 | 1.4 | contraction; embryonic; cytoskeleton/sarcomere | ||
| X80130cds_i_at | Actin, alpha- (cardiac) | -1.8 | -2.8 | -1.1 | 1.5 | contraction; embryonic; cytoskeleton/sarcomere | ||
| X04267_at | myosin heavy chain 3 | -1.5 | -3.0 | -6.5 | -4.5 | contraction; embryonic; cytoskeleton/sarcomere | ||
| K03468_s_at | myosin heavy chain 3 | -1.2 | -2.6 | -4.9 | -3.7 | contraction; embryonic; cytoskeleton/sarcomere | ||
| M12098_s_at | Myosin heavy chain, embryonic | -1.4 | -4.5 | -21.8 | -16.1 | contraction; embryonic; cytoskeleton/sarcomere | ||
| K03467_s_at | Myosin heavy chain, embryonic | -1.5 | -3.2 | -19.4 | -16.2 | contraction; embryonic; cytoskeleton/sarcomere | ||
| S68736_at | Myosin heavy chain 2D/2X | -1.6 | 30.0 | 6.3 | 59.4 | contraction; fast; cytoskeleton/sarcomere | ||
| L24897_s_at | Myosin heavy chain IIx/d | 4.0 | 25.6 | 120.7 | 188.3 | contraction; fast; cytoskeleton/sarcomere | ||
| X00975_at | Myosin light chain 2, fast | -1.1 | 1.6 | 1.4 | 4.8 | contraction; fast; cytoskeleton/sarcomere | ||
| X00975_g_at | Myosin light chain 2, fast | -1.2 | 1.6 | 1.4 | 5.5 | contraction; fast; cytoskeleton/sarcomere | ||
| M15474cds_s_at | Tropomyosin 1 (alpha) | 1.2 | 2.4 | 1.8 | 9.7 | contraction; fast; cytoskeleton/sarcomere | ||
| M34134_s_at | Tropomyosin 1 (alpha) | 1.1 | 2.2 | 1.8 | 6.4 | contraction; fast; cytoskeleton/sarcomere | ||
| rc_AA799680_at | tropomyosin, alpha-; EST (rat) | 1.7 | 1.9 | 1.9 | 2.3 | contraction; fast; cytoskeleton/sarcomere | ||
| rc_AI639532_at | Troponin C, fast skeletal EST (mouse) | 1.0 | 2.1 | 2.4 | 9.5 | contraction; fast; cytoskeleton/sarcomere | ||
| M73701_at | Troponin I, skeletal, fast 2 | 1.0 | 2.7 | 1.8 | 12.9 | contraction; fast; cytoskeleton/sarcomere | ||
| rc_AI136540_at | Troponin T, fast skeletal | -1.0 | 2.5 | 1.7 | 8.6 | contraction; fast; cytoskeleton/sarcomere | ||
| M99223_at | ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 | 1.2 | 2.9 | 3.8 | 5.9 | contraction; fast; membrane depolarization | ||
| Y09453cds_at | Calcium channel, voltage-dependent, gamma subunit 1 | 1.2 | 1.9 | 1.9 | 2.3 | contraction; fast; membrane depolarization | ||
| rc_AA891614_at | Calcium channel, voltage gated (Tpcn1) | 1.2 | 1.7 | 1.1 | 2.4 | contraction; membrane depolarization | ||
| rc_AI175539_at | Parvalbumin | 1.3 | 3.1 | 5.7 | 5.6 | contraction; membrane depolarization | ||
| U33287_at | Calsequestrin 2 | 1.1 | -2.7 | -4.1 | -3.0 | contraction; slow; cytoskeleton/sarcomere | ||
| M11851_at | Myosin light chain 2, slow | -1.3 | -6.2 | -23.1 | -10.4 | contraction; slow; cytoskeleton/sarcomere | ||
| X07314cds_at | Myosin light chain 2, slow | -1.2 | -5.3 | -61.3 | -12.6 | contraction; slow; cytoskeleton/sarcomere | ||
| X07314cds_g_at | Myosin light chain 2, slow | -1.3 | -5.3 | -36.1 | -7.2 | contraction; slow; cytoskeleton/sarcomere | ||
| X05566_i_at | Myosin light chain RLC | -1.4 | -4.5 | -3.7 | -2.8 | contraction; slow; cytoskeleton/sarcomere | ||
| X54617mRNA_s_at | myosin regulatory light chain, exon 4 | -1.4 | -3.7 | -3.2 | -2.2 | contraction; slow; cytoskeleton/sarcomere | ||
| S82383_s_at | slow-twitch alpha TM/hTMnm homolog | -1.9 | -1.5 | -1.8 | -2.1 | contraction; slow; cytoskeleton/sarcomere | ||
| J04993_at | Troponin I, skeletal, slow 1 | -1.2 | -2.4 | -2.4 | -2.2 | contraction; slow; cytoskeleton/sarcomere | ||
| U04937_s_at | Na-Ca exchanger; sodium-calcium exchanger | -1.6 | -2.8 | -6.0 | -2.9 | contraction; slow; membrane depolarization | ||
| rc_AA800206_at | Actinin 1, alpha EST (rat) | -1.0 | -2.1 | -2.2 | -1.7 | contraction; unclassified; cytoskeleton/sarcomere | ||
| U59241_at | E-Tropomodulin | 1.4 | 2.9 | 4.7 | 4.1 | contraction; unclassified; cytoskeleton/sarcomere | ||
| X02412_at | Tropomyosin 3 alpha | -1.1 | 1.1 | 1.5 | 5.3 | contraction; unclassified; cytoskeleton/sarcomere | ||
| S50879_g_at | Acetylcholinesterase T subunit | 1.7 | 1.6 | 1.6 | 2.3 | contraction; unclassified; membrane depolarization | ||
| S50879_at | Acetylcholinesterase T subunit | 1.2 | 1.1 | 2.2 | 1.5 | contraction; unclassified; membrane depolarization | ||
| X62894_at | Chloride channel 1 (skeletal muscle) | 2.5 | 1.3 | 3.1 | 4.2 | contraction; unclassified; membrane depolarization | ||
| X62841mRNA_at | potassium channel protein (2858 bp) | 1.5 | 2.4 | 2.0 | 2.8 | contraction; unclassified; membrane depolarization | ||
| X78461_at | potassium inwardly-rectifying channel, subfamily J, member 12 | -1.3 | 3.7 | 2.8 | 2.2 | contraction; unclassified; membrane depolarization | ||
| rc_AI009806_at | Dynein, cytoplasmic, light chain 1 | -2.1 | -2.0 | -1.9 | -1.3 | cytoskeleton/sarcomere; structural | ||
| rc_H31144_g_at | formin 2; EST (mouse) | 1.5 | 1.7 | 2.1 | 2.1 | cytoskeleton/sarcomere; structural | ||
| rc_AA957930_s_at | Microtubule-associated protein tau | -1.0 | -1.4 | -1.7 | -2.1 | cytoskeleton/sarcomere; structural | ||
| rc_AI227608_s_at | Microtubule-associated protein tau | -1.1 | -1.8 | -2.9 | -5.7 | cytoskeleton/sarcomere; structural | ||
| X79321_at | Microtubule-associated protein tau | -1.0 | -1.4 | -1.7 | -2.6 | cytoskeleton/sarcomere; structural | ||
| rc_AA799508_at | Microtubule-associated proteins 1A/1B light chain 3 | 1.2 | 1.6 | 1.5 | 2.1 | cytoskeleton/sarcomere; structural | ||
| U05784_s_at | Microtubule-associated proteins 1A/1B light chain 3 | 1.1 | 2.3 | 3.2 | 1.5 | cytoskeleton/sarcomere; structural | ||
| rc_AI639151_at | pinin, ESTs (mouse) | 1.9 | 1.1 | 2.2 | 1.4 | cytoskeleton/sarcomere; structural | ||
| rc_AA800948_at | Tubulin alpha-1 chain; EST (rat) | -3.1 | -4.3 | -4.9 | -1.0 | cytoskeleton/sarcomere; structural | ||
| rc_AA799591_at | Tubulin, beta-, EST (rat) | -2.0 | -2.3 | -1.6 | -1.2 | cytoskeleton/sarcomere; structural | ||
| rc_AI231472_s_at | Collagen, alpha 1 type I | 1.1 | -1.4 | -1.5 | -2.2 | ECM structrual/regulator | ||
| U75405UTR#1_f_at | Collagen, alpha 1 type I | -1.0 | -1.1 | -1.6 | -2.0 | ECM structrual/regulator | ||
| rc_AI179399_at | Collagen, alpha 2 type V | -1.1 | -1.2 | -1.5 | -2.0 | ECM structrual/regulator | ||
| rc_AA800844_s_at | Protein-lysine 6-oxidase | -1.3 | -1.7 | -2.1 | -2.3 | ECM structrual/regulator | ||
| J05166_g_at | Solute carrier family 4, member 2 | 1.9 | 1.5 | 2.6 | 1.4 | ion transport | inorganic anion exchanger activity; pH regulation; oxidative stress | |
| AF035943_at | Uncoupling protein 3, mitochondrial | 1.4 | -1.1 | 2.6 | 1.2 | ion transport; hydrogen | ||
| AF051561_s_at | Solute carrier family 12, member 2 | 2.3 | 2.3 | 1.2 | 1.4 | ion transport; sodium/chloride-potassium/chloride | ||
| U14007_at | Aquaporin 4 | -1.1 | 1.4 | 3.4 | 3.3 | ion transport; sodium/phosphate symporter | water transport | |
| AB000507_at | Aquaporin 7 | -1.3 | -2.8 | -1.9 | -3.0 | ion transport; sodium/phosphate symporter | water transport | |
| L19931_at | Solute carrier family 20, member 2 | 1.5 | 1.6 | 2.5 | 1.6 | ion transport; sodium/phosphate symporter | ||
| J05167_at | Solute carrier family 4 member 3 anion exchange protein 3; Cl-/HCO3- exchanger (B3RP3) | 1.0 | -2.7 | -3.1 | -2.7 | ion transport; sodium/phosphate symporter | ||
| rc_AI177026_at | ATPase Na K transporting alpha 2 | 1.6 | 2.5 | 2.7 | 1.9 | ion transport; sodium/potassium | ||
| rc_AI112173_at | ATPase Na K transporting beta 1 | -1.2 | -2.2 | -1.6 | -1.2 | ion transport; sodium/potassium | ||
| rc_AI230614_s_at | ATPase Na K transporting beta 1 | -1.0 | -2.1 | -1.4 | -1.4 | ion transport; sodium/potassium | ||
| M22253_at | Sodium channel, voltage-gated, type 1, alpha polypeptide | -4.8 | -1.2 | -9.3 | -1.0 | ion transport; sodium/potassium | ||
| AF001898_at | Aldehyde dehydrogenase 1 | 1.3 | 1.4 | 2.2 | 1.5 | metabolism; aldehyde | ||
| rc_AI172017_at | aldehyde dehydrogenase 2 | 1.4 | 2.0 | 1.9 | 1.3 | metabolism; aldehyde | ||
| L10669_g_at | Glycogen phosphorylase muscle isozyme | 1.5 | 2.4 | 3.3 | 2.9 | metabolism; carbohydrate; glycogenolysis | ||
| L10669_at | Glycogen phosphorylase muscle isozyme | 1.4 | 2.2 | 2.9 | 2.6 | metabolism; carbohydrate; glycogenolysis | ||
| U20195_s_at | Phosphoglucomutase 1 | 1.5 | 1.7 | 2.1 | 2.0 | metabolism; carbohydrate; glycogenolysis | ||
| rc_AA894296_at | Phosphoglucomutase 1 | 1.2 | 1.7 | 2.2 | 1.6 | metabolism; carbohydrate; glycogenolysis | ||
| L11694_at | Phosphoglucomutase 1 | 1.5 | 1.7 | 2.4 | 2.1 | metabolism; carbohydrate; glycogenolysis | ||
| M98826mRNA_g_at | Phosphorylase kinase, gamma | 1.1 | 2.5 | 2.9 | 3.8 | metabolism; carbohydrate; glycogenolysis | ||
| X07320_at | Phosphorylase kinase, gamma 1 | 1.2 | 2.0 | 2.5 | 2.9 | metabolism; carbohydrate; glycogenolysis | ||
| rc_AI176052_at | Adenylate kinase 3 | 1.2 | 2.2 | 1.9 | 1.9 | metabolism; carbohydrate; glycolytic | ||
| M12919mRNA#2_at | Aldolase A, fructose-bisphosphate | -1.0 | 1.2 | 1.9 | 2.4 | metabolism; carbohydrate; glycolytic | ||
| rc_AA924326_s_at | Aldolase A, fructose-bisphosphate | 1.0 | 1.4 | 2.3 | 2.8 | metabolism; carbohydrate; glycolytic | ||
| AJ005046_g_at | Fructose bisphosphatase 2, muscle | 1.2 | -1.0 | 2.0 | 6.4 | metabolism; carbohydrate; glycolytic | ||
| X15580complete_seq_s_at | fructose-2,6-bisphosphatase 1 | 2.5 | 3.8 | 3.7 | 5.3 | metabolism; carbohydrate; glycolytic | ||
| J04197_i_at | fructose-2,6-bisphosphatase 1 | 1.9 | 1.8 | 1.2 | 3.2 | metabolism; carbohydrate; glycolytic | ||
| AF080468_g_at | Glucose-6-phosphatase, transport protein 1 | 1.8 | 2.6 | 1.8 | 1.6 | metabolism; carbohydrate; glycolytic | ||
| AF080468_at | Glucose-6-phosphatase, transport protein 1 | 1.5 | 2.3 | 1.4 | 1.9 | metabolism; carbohydrate; glycolytic | ||
| X78593_at | glycerol-3-phosphate dehydrogenase 2 | 2.0 | 2.9 | 1.4 | 1.4 | metabolism; carbohydrate; glycolytic | ||
| U83880UTR#1_at | glycerol-3-phosphate dehydrogenase 2 | 1.6 | 2.0 | 5.0 | 4.9 | metabolism; carbohydrate; glycolytic | ||
| S56464mRNA_at | Hexokinase II | -1.3 | -1.1 | 2.0 | 2.0 | metabolism; carbohydrate; glycolytic | ||
| D26393exon_s_at | Hexokinase II | -1.9 | 1.2 | 1.7 | 2.2 | metabolism; carbohydrate; glycolytic | ||
| rc_AA892314_at | Isocitrate dehydrogenase 1, soluble | 2.0 | 2.0 | 2.3 | 1.4 | metabolism; carbohydrate; glycolytic | ||
| M54926_at | Lactate dehydrogenase A | 1.0 | 1.3 | 1.8 | 2.7 | metabolism; carbohydrate; glycolytic | ||
| U87627_at | Monocarboxylate transporter | 1.4 | 1.8 | 1.8 | 3.4 | metabolism; carbohydrate; glycolytic | ||
| rc_AA851223_at | Muscle specific enolase (beta beta enolose) | 1.1 | 1.8 | 2.0 | 4.1 | metabolism; carbohydrate; glycolytic | ||
| U25651_at | Phosphofructokinase, muscle | 1.4 | 1.9 | 2.0 | 2.4 | metabolism; carbohydrate; glycolytic | ||
| S63233_g_at | Phosphoglycerate mutase 1 type B | -1.8 | -2.1 | -2.2 | -2.3 | metabolism; carbohydrate; glycolytic | ||
| U32314_at | Pyruvate carboxylase | 1.4 | 1.4 | 2.3 | 1.5 | metabolism; carbohydrate; glycolytic | ||
| U10357_at | pyruvate dehydrogenase kinase 2 | 1.4 | 2.0 | 2.1 | 1.5 | metabolism; carbohydrate; glycolytic | ||
| AF034577_at | Pyruvate dehydrogenase kinase, isoenzyme 4 | -2.4 | -3.2 | -1.1 | -1.5 | metabolism; carbohydrate; glycolytic | ||
| AF062740_g_at | Pyruvate dehydrogenase phosphatase isoenzyme 1 | 4.3 | 8.8 | 3.8 | 2.7 | metabolism; carbohydrate; glycolytic | ||
| AF062740_at | Pyruvate dehydrogenase phosphatase isoenzyme 1 | 2.1 | 2.2 | 2.0 | 1.6 | metabolism; carbohydrate; glycolytic | ||
| rc_AA818951_at | Pyruvate kinase 3 | 1.1 | 1.6 | 2.3 | 3.0 | metabolism; carbohydrate; glycolytic | ||
| X65296cds_s_at | carboxylesterase | 1.7 | 9.6 | 4.0 | 3.2 | metabolism; lipid | ||
| L46791_at | carboxylesterase 3 | 7.6 | 10.6 | 1.0 | 2.6 | metabolism; lipid | ||
| rc_AI236284_s_at | Fatty acid-Coenzyme A ligase, long chain 4 | 1.6 | 2.2 | 3.5 | 1.8 | metabolism; lipid biosynthesis | ||
| D85189_at | Fatty acid-Coenzyme A ligase, long chain 4 | -1.0 | 2.3 | 2.3 | 1.6 | metabolism; lipid biosynthesis | ||
| S56508_s_at | Phosphatidylinositol 4-kinase | 3.9 | 4.9 | 6.2 | 4.3 | metabolism; lipid biosynthesis | ||
| X13527cds_s_at | fatty acid synthase | 1.5 | 1.1 | -1.2 | 2.1 | metabolism; lipid; FA oxidation | ||
| Y09333_at | Mitochondrial acyl-CoA thioesterase 1 | 1.1 | -1.9 | -1.5 | -2.1 | metabolism; lipid; FA oxidation | ||
| J02585_at | Stearoyl-Coenzyme A desaturase 1 | 3.3 | 5.8 | 2.0 | 6.9 | metabolism; lipid; FA oxidation | ||
| U36772_at | Glycerol-3-phosphate acyltransferase | 1.3 | 1.6 | 2.3 | 1.5 | metabolism; lipid; thermogenesis | ||
| U36773_g_at | glycerol-3-phosphate acyltransferase, mitochondrial | 1.7 | 1.4 | 2.2 | -1.2 | metabolism; lipid; thermogenesis | ||
| S76779_s_at | apolipoprotein E | 1.6 | 1.9 | 2.1 | 1.9 | metabolism; lipid; uptake and transport | ||
| J02773_at | Fatty acid binding protein, heart | -1.3 | -4.3 | -3.2 | -5.1 | metabolism; lipid; uptake and transport | ||
| L03294_g_at | Lipoprotein lipase | -1.1 | -2.4 | -1.8 | -1.7 | metabolism; lipid; uptake and transport | ||
| L03294_at | Lipoprotein lipase | -1.1 | -2.3 | -1.8 | -1.7 | metabolism; lipid; uptake and transport | ||
| M59861_at | 10-formyltetrahydrofolate dehydrogenase | 1.1 | 3.3 | 2.8 | 2.2 | metabolism; miscellaneous | ||
| AF037072_at | Carbonic anhydrase 3 | -1.1 | -4.9 | -8.8 | -7.7 | metabolism; miscellaneous | ||
| Y12517cds_at | Cytochrome b5, outer mitochondrial membrane isoform | 3.1 | 1.1 | 1.2 | 1.4 | metabolism; respiratory | ||
| X64827cds_s_at | Cytochrome C oxidase subunit VIIIh (heart/muscle) | 1.2 | -1.4 | -1.6 | -2.6 | metabolism; respiratory | ||
| D13123_s_at | ATP synthase, H+ transporting, mitochondrial F0 complex, subunit 9 | -1.1 | -1.7 | -2.2 | -1.8 | metabolism; respiratory chain | ||
| J05210_g_at | ATP citrate lyase | 1.2 | 1.3 | 1.2 | 2.1 | metabolism; tricarboxylic acid cycle | ||
| rc_AA817846_at | 3-hydroxybutyrate dehydrogenase | -1.1 | -2.2 | -1.8 | -3.1 | protein turnover; metabolism | ||
| rc_AA892799_s_at | 3-phosphoglycerate dehydrogenase, ESTs, (rat) | 2.6 | 2.1 | 2.2 | 1.6 | protein turnover; metabolism; protein; amino acid | ||
| U70825_at | 5-oxoprolinase (ATP-hydrolysing) | 1.2 | 1.6 | 1.6 | 2.0 | protein turnover; metabolism; protein; amino acid | ||
| M98819mRNA_s_at | Adenosine monophosphate deaminase 1 | 1.1 | 1.6 | 2.0 | 1.9 | protein turnover; metabolism; protein; amino acid | ||
| J02827_at | Branched chain alpha-ketoacid dehydrogenase subunit E1 alpha | 1.6 | 2.1 | 2.1 | 1.8 | protein turnover; metabolism; protein; amino acid | ||
| U35774_at | Branched chain aminotransferase 1, cytosolic | -1.5 | -2.3 | -1.4 | -1.0 | protein turnover; metabolism; protein; amino acid | ||
| S61960_s_at | Cysteine conjugate beta-lyase | 2.2 | 2.4 | 1.6 | 1.2 | protein turnover; metabolism; protein; amino acid | ||
| rc_AA942685_at | Cysteine dioxygenase 1 | 1.4 | 3.2 | 3.1 | 1.8 | protein turnover; metabolism; protein; amino acid | ||
| M77694_at | Fumarylacetoacetate hydrolase | 2.0 | 1.7 | 2.0 | 2.1 | protein turnover; metabolism; protein; amino acid | ||
| M91652complete_seq_g_at | Glutamine synthetase glutamate-ammonia ligase | 1.3 | 3.4 | 6.9 | 3.5 | protein turnover; metabolism; protein; amino acid | ||
| rc_AA852004_s_at | Glutamine synthetase glutamate-ammonia ligase | 1.1 | 3.4 | 7.2 | 3.7 | protein turnover; metabolism; protein; amino acid | ||
| M91652complete_seq_at | Glutamine synthetase glutamate-ammonia ligase | -1.1 | 4.2 | 9.6 | 4.4 | protein turnover; metabolism; protein; amino acid | ||
| rc_AI232783_s_at | Glutamine synthetase glutamate-ammonia ligase | 1.0 | 2.1 | 4.9 | 3.3 | protein turnover; metabolism; protein; amino acid | ||
| M93401_at | methylmalonate semialdehyde dehydrogenase gene | 1.5 | 1.8 | 2.1 | 1.7 | protein turnover; metabolism; protein; amino acid | ||
| rc_AA893325_at | ornithine aminotransferase | 1.0 | 2.8 | 1.2 | 1.0 | protein turnover; metabolism; protein; amino acid | ||
| J04791_s_at | ornitine decarboxylase | -3.9 | -1.6 | -2.3 | -2.0 | protein turnover; metabolism; protein; amino acid | ||
| J04792_at | ornitine decarboxylase | -2.0 | -2.0 | -2.2 | -2.3 | protein turnover; metabolism; protein; amino acid | ||
| X89225cds_s_at | Protein linked to system L-like neutral amino acid transport activity | -1.2 | -1.4 | -1.3 | -2.1 | protein turnover; metabolism; protein; amino acid | ||
| AB015433_s_at | solute carrier family 3, member 2 | -1.4 | -2.0 | -1.9 | -3.4 | protein turnover; metabolism; protein; amino acid | ||
| X60351cds_s_at | Alpha B-crystallin | -1.4 | -6.6 | -5.9 | -4.2 | protein turnover; protein folding | ||
| M55534mRNA_s_at | Crystallin, alpha polypeptide 2 | -1.2 | -6.5 | -6.2 | -4.7 | protein turnover; protein folding | ||
| AA848268_at | DnaJ Homolog 5 | -1.0 | -1.9 | -2.2 | -1.9 | protein turnover; protein folding | ||
| rc_AA891542_at | DnaJ Homolog 5 | -2.3 | -1.7 | -1.5 | -1.6 | protein turnover; protein folding | ||
| S63521_i_at | Glucose-regulated protein GRP78 | -1.6 | -8.8 | -3.3 | -4.5 | protein turnover; protein folding | ||
| D29960_at | Heat shock 20-kDa protein | -1.3 | -3.8 | -3.4 | -2.7 | protein turnover; protein folding | ||
| rc_AI103838_g_at | Heat shock 20-kDa protein | -1.5 | -4.4 | -3.3 | -2.6 | protein turnover; protein folding | ||
| M86389cds_s_at | Heat shock 27kD protein 1 | -2.1 | -1.3 | 1.2 | -1.9 | protein turnover; protein folding | ||
| AF077354_g_at | heat shock 70 kDa protein 4 | -1.2 | -1.9 | -1.9 | -2.3 | protein turnover; protein folding | ||
| M14050_s_at | heat shock 70kD protein 5 | -2.1 | -2.7 | -1.8 | -2.2 | protein turnover; protein folding | ||
| L16764_s_at | Heat shock protein 70 | -3.4 | -3.6 | -2.8 | -2.1 | protein turnover; protein folding | ||
| Z75029_s_at | Heat shock protein 70 | -5.0 | -3.2 | -1.9 | -1.3 | protein turnover; protein folding | ||
| Z27118cds_s_at | Heat shock protein 70 | -6.1 | -3.2 | -2.3 | -2.0 | protein turnover; protein folding | ||
| rc_AA818604_s_at | Heat shock protein 70 | -3.1 | -2.8 | -2.4 | -1.9 | protein turnover; protein folding | ||
| AA848563_s_at | Heat shock protein 70 | -4.0 | -5.6 | -12.8 | -7.4 | protein turnover; protein folding | ||
| rc_AI176546_at | Heat shock protein 90 beta | -3.0 | -2.1 | -2.3 | -2.8 | protein turnover; protein folding | ||
| AA108277_at | Heat shock protein E71, 5' similar to hsp-E7I | -1.7 | -2.2 | -1.9 | -2.7 | protein turnover; protein folding | ||
| rc_AA875531_s_at | Heat shock protein, 60 kDa | 1.1 | -1.3 | -1.9 | -2.1 | protein turnover; protein folding | ||
| X15705cds_at | Testis-specific heat shock protein-related gene hst70 | -2.1 | -2.3 | -2.5 | -1.7 | protein turnover; protein folding | ||
| X62950mRNA_f_at | similar to protease [Sus scrofa] | 2.5 | 2.1 | 1.3 | 1.4 | protein turnover; proteolysis | ||
| U42719_at | Complement component 4 | 1.9 | 2.6 | 1.3 | 3.4 | protein turnover; proteolysis; protease | ||
| M19647_f_at | kallikrein 1 | 1.3 | 2.1 | 2.2 | -1.2 | protein turnover; proteolysis; protease | ||
| rc_AI230712_at | Subtilisin - like endoprotease | 1.3 | 1.2 | 1.3 | 2.1 | protein turnover; proteolysis; protease | ||
| rc_AI010581_at | Diazepam binding inhibitor | -1.0 | -2.0 | -3.0 | -2.0 | protein turnover; proteolysis; protease inhibitor | ||
| rc_AI169327_at | Metalloproteinase-1, tissue inhibitor of- | -1.2 | -2.2 | -1.4 | -2.3 | protein turnover; proteolysis; protease inhibitor | ||
| rc_AI169327_g_at | Metalloproteinase-1, tissue inhibitor of- | -1.3 | -12.2 | -4.2 | -12.4 | protein turnover; proteolysis; protease inhibitor | ||
| M69246_at | Serine (or cysteine) proteinase inhibitor, clade H, member 1; Collagen binding protein | -1.9 | -2.0 | -2.0 | -1.5 | protein turnover; proteolysis; protease inhibitor | ||
| Y07534cds_s_at | Serpin; Serine protease inhibitor; mitochondrial cytochrome P450 | 3.8 | 14.4 | 15.5 | 6.6 | protein turnover; proteolysis; protease inhibitor | ||
| M38566mRNA_s_at | Serpin; Serine protease inhibitor; mitochondrial cytochrome P450 | 2.4 | 7.3 | 8.1 | 3.4 | protein turnover; proteolysis; protease inhibitor | ||
| X56729mRNA_at | Calpastatin/CANP inhibitor | 2.8 | 4.0 | 1.3 | 4.5 | protein turnover; proteolysis; protease inhibitor; calpain | ||
| rc_AI231292_g_at | Cystatin C | 1.5 | 1.9 | 2.5 | 2.2 | protein turnover; proteolysis; protease inhibitor; cathepsin | ||
| rc_AI231292_at | Cystatin C | 1.4 | 2.1 | 3.2 | 3.1 | protein turnover; proteolysis; protease inhibitor; cathepsin | ||
| X87157_at | Neurolysin (metallopeptidase M3 family) | 1.4 | 1.6 | 2.3 | 2.3 | protein turnover; proteolysis; protease; | ||
| D90404_at | Cathepsin C | 1.8 | 2.1 | 2.4 | 3.0 | protein turnover; proteolysis; protease; lysosomal | ||
| D90404_g_at | Cathepsin C (dipeptidyl peptidase I) | -1.3 | 1.1 | 5.6 | 4.0 | protein turnover; proteolysis; protease; lysosomal | ||
| X54467_at | Cathepsin D (preprocathepsin) | 1.2 | 2.3 | 1.9 | 1.5 | protein turnover; proteolysis; protease; lysosomal | ||
| S85184_at | Cathepsin L | 1.1 | 3.3 | 5.1 | 1.6 | protein turnover; proteolysis; protease; lysosomal | ||
| rc_AI176595_s_at | Cathepsin L | 1.4 | 3.1 | 4.6 | 2.2 | protein turnover; proteolysis; protease; lysosomal | ||
| S85184_g_at | Cathepsin L proenzyme | 1.2 | 1.7 | 2.6 | 1.4 | protein turnover; proteolysis; protease; lysosomal | ||
| D50694_at | Proteasome (prosome, macropain) 26S subunit, ATPase | 1.0 | 2.1 | 1.7 | 1.1 | protein turnover; proteolysis; protease; proteasome subunit; | ||
| U77918_at | Proteasome 26S subunit, ATPase 3 | 1.0 | 2.2 | 1.8 | 1.1 | protein turnover; proteolysis; protease; proteasome subunit; | ||
| D50695_at | Proteasome 26S subunit, ATPase 4 (Tat-binding protein) | 1.1 | 2.5 | 1.8 | 1.1 | protein turnover; proteolysis; protease; proteasome subunit; | ||
| AB000491_at | Proteasome 26S subunit, ATPase 5 (SUG1) | 1.1 | 2.3 | 2.0 | 1.7 | protein turnover; proteolysis; protease; proteasome subunit; | ||
| AJ006340_s_at | Proteasome 26S subunit, p112 | 1.2 | 2.7 | 2.6 | 1.7 | protein turnover; proteolysis; protease; proteasome subunit; | ||
| X55986mRNA_s_at | Proteasome subunit, alpha 4 | 1.1 | 2.2 | 1.7 | -1.2 | protein turnover; proteolysis; protease; proteasome subunit; | ||
| L17127_g_at | Proteasome subunit, beta 4 (RN3) | 1.4 | 2.4 | 1.3 | 1.3 | protein turnover; proteolysis; protease; proteasome subunit; | ||
| rc_AI172162_at | Proteasome subunit, beta 4 (RN3) | 1.1 | 2.2 | 1.5 | 1.1 | protein turnover; proteolysis; protease; proteasome subunit; | ||
| U13895_s_at | Proteasome subunit, MSS1 | 1.2 | 2.6 | 2.1 | 1.1 | protein turnover; proteolysis; protease; proteasome subunit; | ||
| AF004661_at | mannose-binding protein associated serine protease-1 | 1.3 | 1.7 | 2.5 | 3.4 | protein turnover; proteolysis; serine protease | ||
| U61729_at | proline rich 2 | 1.3 | 1.6 | 2.4 | 1.5 | protein turnover; proteolysis; ubiquitination | ||
| D17296_at | Ubiquitin C | 2.0 | 2.1 | 2.4 | 1.5 | protein turnover; proteolysis; ubiquitination | ||
| rc_AI639312_at | Ubiquitin-protein ligase E3 (Atrogin1) | 1.9 | 2.0 | 3.0 | 1.8 | protein turnover; proteolysis; ubiquitination | ||
| U50842_at | Ubiquitin-protein ligase E3 (Nedd4) | 2.2 | 2.5 | 2.9 | 1.7 | protein turnover; proteolysis; ubiquitination | ||
| X96426_at | eukaryotic elongation factor 2 kinase | 1.7 | 1.3 | 2.3 | 2.3 | protein turnover; translation; inhibitor | IGF | |
| rc_AI059692_s_at | eukaryotic elongation factor 2 kinase | 1.7 | 2.3 | 2.7 | 2.1 | protein turnover; translation; inhibitor | IGF | |
| U05014_at | eukaryotic translation initiation factor 4E binding protein 1 | 2.2 | 2.7 | 6.4 | 1.8 | protein turnover; translation; inhibitor | IGF | |
| U05014_g_at | eukaryotic translation initiation factor 4E binding protein 1 | 1.4 | 2.3 | 3.8 | 1.7 | protein turnover; translation; inhibitor | IGF | |
| rc_AA799539_at | NS1-binding protein, EST (human) | 2.8 | 2.4 | 3.1 | 2.4 | protein turnover; translation; mRNA processing | ||
| U25746_at | RNA helicase with arginine-serine-rich domain | 1.5 | 2.1 | 1.1 | 1.4 | protein turnover; translation; mRNA processing | ||
| U25746_g_at | RNA helicase with arginine-serine-rich domain | 1.3 | 2.1 | 1.8 | 1.4 | protein turnover; translation; mRNA processing | ||
| L13635_s_at | Splicing factor, arginine/serine-rich 5 | 1.8 | 1.6 | 2.2 | 1.9 | protein turnover; translation; mRNA processing | ||
| rc_AI175486_at | Ribosomal protein S7 | -1.1 | 1.7 | 1.7 | 2.2 | protein turnover; translation; ribosomal protein | ||
| AF056034_s_at | b-Nexilin | 1.0 | -2.0 | -2.1 | -1.2 | regulatory; adhesion | adhesion | |
| rc_AA799423_at | b-Nexilin | -1.0 | -1.9 | -2.1 | -1.4 | regulatory; adhesion | adhesion | |
| M31725_at | Contactin 2 | 2.2 | 1.8 | 1.8 | -1.0 | regulatory; adhesion | development; adhesion; membrane targeting | |
| rc_AA891527_at | Four and a half LIM domains 2 (Slim3) | -5.9 | -3.5 | -3.7 | -4.6 | regulatory; adhesion | differentiation; NFKB; IGF; adhesion; LIM; myogenesis | |
| S61868_g_at | Syndecan-4 | -2.2 | -1.6 | -1.2 | -1.3 | regulatory; adhesion | adhesion | |
| rc_AA800962_at | Talin; ESTs (mouse) | -1.2 | -3.9 | -1.3 | -1.3 | regulatory; adhesion | adhesion | |
| U14950_at | Discs, large homolog 1 (Drosophila) | 1.9 | 2.2 | 2.5 | 1.6 | regulatory; cytoskeletal regulator | PDZ; SH3; cytoskeletal organization; tumor supressor | |
| rc_AA799773_g_at | Filamin, gamma-, EST (human) | -1.6 | -2.2 | -1.4 | -1.5 | regulatory; cytoskeletal regulator | cytoskeletal organization | |
| rc_AA799773_at | Filamin, gamma-, EST (human) | -1.7 | -2.3 | -1.3 | -1.2 | regulatory; cytoskeletal regulator | cytoskeletal organization | |
| X81193_at | Muscle LIM protein; cysteine-rich protein | -2.3 | -3.7 | -2.1 | -1.9 | regulatory; cytoskeletal regulator | development; differentiation; myogenesis; LIM | |
| AB019393_at | myocilin | 2.4 | 2.0 | 1.3 | 1.7 | regulatory; cytoskeletal regulator | cytoskeletal organization | |
| J03886_at | Myosin light chain kinase 2, skeletal muscle | 1.4 | 1.6 | 2.1 | 1.9 | regulatory; cytoskeletal regulator | adhesion; cytoskeletal organization; calcium signaling | |
| M83107_at | Transgelin, SM22 alpha | -3.7 | -4.3 | -2.5 | -1.7 | regulatory; cytoskeletal regulator | cytoskeletal organization | |
| M83107_g_at | Transgelin, SM22 alpha | -2.2 | -2.8 | -1.6 | -1.7 | regulatory; cytoskeletal regulator | cytoskeletal organization | |
| AB006914_at | Trip 10, thyroid hormone receptor interactor 10 | 1.3 | 1.5 | 2.1 | 1.7 | regulatory; cytoskeletal regulator | cytoskeletal organization; SH3 | |
| U58858_at | unction plakoglobin | 1.7 | 1.6 | 1.9 | 2.1 | regulatory; cytoskeletal regulator | cytoskeletal organization | |
| AF072892_s_at | Chondroitin sulfate proteoglycan 2 | -2.1 | -1.8 | -1.7 | -1.3 | regulatory; growth/proliferation; ECM | ||
| rc_AA799732_at | DiGeorge syndrome critical region gene 6; EST (mouse) | 1.4 | 2.3 | 1.4 | 1.4 | regulatory; growth/proliferation; ECM | ||
| rc_AI233219_at | Endothelial cell-specific molecule 1; Pineal specific PG25 protein | -1.5 | -2.8 | -1.7 | -1.8 | regulatory; growth/proliferation; ECM | IGF; cytokine signaling; tumor supressor; secreted growth factor activity | insulin-like growth factor binding activity; secreted protein which is mainly expressed in the endothelial cells in human lung and kidney tissues |
| L17318_at | proline-rich proteoglycan 2 | 1.2 | 1.5 | 1.0 | 2.8 | regulatory; growth/proliferation; ECM | ||
| M14656_at | Secreted phosphoprotein 1 | -1.6 | -2.5 | -1.2 | -2.2 | regulatory; growth/proliferation; ECM | ||
| S45663_at | Synaptic vesicle glycoprotein Sc2 | 1.2 | -1.5 | -2.1 | -1.8 | regulatory; growth/proliferation; growth factor | development; synaptic | |
| L26292_g_at | FSH-regulated | 1.2 | -3.7 | -2.5 | -2.1 | regulatory; growth/proliferation; growth factor activity | ||
| AF076619_at | Growth factor receptor bound protein 14 | 1.3 | 2.0 | 1.8 | 1.4 | regulatory; growth/proliferation; growth factor activity | SH3; SH2; neuropeptide signaling pathway; secreted growth factor activity | |
| S49003_s_at | Growth hormone receptor, short isoform | -1.2 | 6.5 | 1.4 | 3.9 | regulatory; growth/proliferation; growth factor activity | secreted growth factor activity | |
| M62781_at | Insulin-like growth factor-binding protein 5 | 3.7 | 3.0 | 8.4 | 4.1 | regulatory; growth/proliferation; growth factor activity | IGF; secreted growth factor activity; myogenesis | |
| M31837_at | insulin-like growth factor binding protein 3 | 1.5 | 1.3 | 2.6 | 1.2 | regulatory; growth/proliferation; growth factor activity; | IGF; secreted growth factor activity; myogenesis | |
| rc_AI029920_s_at | Insulin-like growth factor-binding protein 5 | 4.7 | 2.8 | 6.0 | 4.3 | regulatory; growth/proliferation; growth factor activity; | IGF; secreted growth factor activity; myogenesis | |
| D16443_g_at | Prostaglandin E receptor 3 ( subtype EP3) | -1.0 | 1.0 | -1.1 | 2.1 | regulatory; growth/proliferation; growth factor activity; | cAMP responsive; GTP signaling; thermogenesis | |
| U69272_at | Interleukin 15 | 2.2 | 2.0 | 2.1 | 3.0 | regulatory; growth/proliferation; growth factor activity; positive | apoptosis; secreted growth factor activity; cytokine signaling; endosome; JAK-STAT | This cytokine induces the activation of JAK kinases, as well as the phosphorylation and activation of transcription activators STAT3, STAT5, and STAT6. |
| M32167_g_at | Vascular endothelial growth factor-A188 | -1.4 | -2.3 | -1.6 | -1.7 | regulatory; growth/proliferation; growth factor activity; positive | positive regulation of cell proliferation | |
| L10640_s_at | Activin type IIB receptor | 3.1 | 2.5 | 5.1 | 5.8 | regulatory; growth/proliferation; growth factor activity; TGF-beta | transmembrane receptor; secreted growth factor activity; SMAD; TGFbeta receptor signaling pathway | |
| X59864mRNA_at | Adult skeletal muscle gene 15; H19 | -1.0 | -2.1 | -2.1 | -1.4 | regulatory; growth/proliferation; proliferation | IGF; development; translation regulator; 4E-BP1; p70(S6k) | The results showed that the well-documented early effects of clenbuterol on protein metabolism were preceded by elevated levels of IGF-II and H19 transcripts together with increased phosphorylation of eukaryotic initiation factor (eIF)4E binding protein-1 |
| X59864mRNA_g_at | Adult skeletal muscle gene 15; H19 | -1.0 | -2.3 | -2.3 | -1.5 | regulatory; growth/proliferation; proliferation | IGF; development; translation regulator; 4E-BP1; p70(S6k) | The results showed that the well-documented early effects of clenbuterol on protein metabolism were preceded by elevated levels of IGF-II and H19 transcripts together with increased phosphorylation of eukaryotic initiation factor (eIF)4E binding protein-1 |
| AF051895_at | Annexin 5 | -1.2 | -2.2 | -2.1 | -2.2 | regulatory; growth/proliferation; proliferation | apoptosis; calcium signaling | |
| D42137exon_s_at | Annexin 5 | -1.0 | -2.5 | -2.4 | -2.1 | regulatory; growth/proliferation; proliferation | apoptosis; calcium signaling | |
| U47315_s_at | Apoptosis-regulating basic protein | 1.2 | -2.1 | -1.9 | -2.0 | regulatory; growth/proliferation; proliferation; apoptosis | apoptosis; | |
| rc_AA893235_at | Putative lymphocyte G0/G1 switch protein 2, EST (mouse) | 5.6 | 2.2 | 1.6 | 2.2 | regulatory; growth/proliferation; proliferation; cell cycle | cell cycle; G0/G1 switch | Genes actively involved in the G0/G1 switch (G0S genes) may be differentially expressed during the lectin-induced switch of lymphocytes from the G0 to the G1 phases of the cell cycle |
| U24174_at | Cyclin-dependent kinase inhibitor 1A (P21) | 1.9 | 2.0 | 14.2 | 2.5 | regulatory; growth/proliferation; proliferation; cell cycle arrest | cytokine signaling; G1 cyclin/CDK complex inhibtion; p53; AKT/PKB induced; apoptosis; differentiation; development; cell cycle arrest; tumor suppressor; oncogenesis | |
| L41275cds_s_at | Cyclin-dependent kinase inhibitor 1A (P21) | 1.3 | 2.1 | 19.4 | 4.9 | regulatory; growth/proliferation; proliferation; cell cycle arrest | cytokine signaling; G1 cyclin/CDK complex inhibtion; p53; AKT/PKB induced; apoptosis; differentiation; development; cell cycle arrest; tumor suppressor; oncogenesis | |
| L32591mRNA_g_at | DNA-damage-inducible transcript 1 | 2.1 | 2.9 | 1.8 | 1.7 | regulatory; growth/proliferation; proliferation; cell cycle arrest | DNA repair; stress or injury; cell cycle arrest; p38/JNK; translation regulator; G2-M arrest; apoptosis | The protein encoded by this gene responds to environmental stresses by mediating activation of the p38/JNK pathway via MTK1/MEKK4 kinase. The DNA damage-induced transcription of this gene is mediated by both p53-dependent and -independent mechanisms. |
| L32591mRNA_at | DNA-damage-inducible transcript 1 | 1.4 | 4.1 | 1.9 | 2.3 | regulatory; growth/proliferation; proliferation; cell cycle arrest | DNA repair; stress or injury; cell cycle arrest; p38/JNK; translation regulator; G2-M arrest; apoptosis | The protein encoded by this gene responds to environmental stresses by mediating activation of the p38/JNK pathway via MTK1/MEKK4 kinase. The DNA damage-induced transcription of this gene is mediated by both p53-dependent and -independent mechanisms. |
| U77829mRNA_i_at | growth arrest specific 5 | 1.5 | 2.1 | 1.5 | 1.2 | regulatory; growth/proliferation; proliferation; cell cycle arrest | cell cycle arrest; differentiation; development | |
| U77829mRNA_s_at | growth arrest specific 5 | 1.5 | 2.7 | 1.5 | -1.0 | regulatory; growth/proliferation; proliferation; cell cycle arrest | cell cycle arrest; differentiation; development | |
| AF062594_g_at | nucleosome assembly protein 1-like 1 | 1.2 | 1.6 | 2.2 | 1.1 | regulatory; growth/proliferation; proliferation; cell cycle; positive | positive regulation of cell proliferation | This protein participates in DNA replication and may play a role in modulating chromatin formation and contribute to the regulation of cell proliferation. |
| rc_AI007857_at | HGF-regulated tyrosine kinase substrate (Hrs) | -1.2 | 2.0 | 2.0 | 1.4 | regulatory; growth/proliferation; proliferation; negative | intracellular trafficking; zinc ion binding activity; Src; endosome; negative regulation of cell proliferation; differentiation | |
| Z54212_at | Epithelial membrane protein 1 | -1.2 | -1.7 | -1.8 | -2.0 | regulatory; growth/proliferation; proliferation; oncogenesis/tumor supressor | secreted growth factor activity; cell proliferation; development; oncogenesis; differentiation | |
| S72637_s_at | NO3; tumor-suppressive gene | 1.2 | 1.4 | 1.9 | 2.1 | regulatory; growth/proliferation; proliferation; oncogenesis/tumor supressor | tumor supressor; cell cycle arrest | |
| X51529_at | Phospholipase A2, group IIA | 2.3 | 1.3 | 1.3 | 1.9 | regulatory; growth/proliferation; proliferation; oncogenesis/tumor supressor | tumor suppressor; oncogenesis; calcium signaling; stress or injury | |
| rc_AA799980_at | Protein phosphatase 1B (2C), magnesium-dependent, beta isoform | -1.9 | -2.1 | -1.2 | -1.7 | regulatory; growth/proliferation; proliferation; oncogenesis/tumor supressor | differentiation | The mRNA level of type 2C protein phosphatase was enhanced in accordance with the differentiation of the C3H10T1/2 cells into myoblasts induced by the transfection of MyoD cDNA. These results suggest that type 2C protein phosphatase is related to the mech |
| L19180_g_at | Protein tyrosine phosphatase, receptor type, D | 1.9 | 4.5 | 8.8 | 4.3 | regulatory; growth/proliferation; proliferation; oncogenesis/tumor supressor | transmembrane receptor; neurogenesis; differentiation; oncogenesis; adhesion | |
| AB014722_at | squamous cell carcinoma antigen recognized by T-cells 1 | 2.0 | 1.3 | 1.4 | 1.8 | regulatory; growth/proliferation; proliferation; oncogenesis/tumor supressor | oncogenesis; tumor supressor | |
| X86789_at | synuclein, gamma | 1.3 | 1.8 | 2.8 | 5.5 | regulatory; growth/proliferation; proliferation; oncogenesis/tumor supressor | oncogenesis | |
| X56551cds_at | fibroblast growth factor 7 | 2.3 | 1.8 | 1.7 | 3.2 | regulatory; growth/proliferation; secreted growth factor | secreted growth factor activity; positive regulation of cell proliferation; differentiation | |
| rc_AA858520_g_at | Follistatin | 1.4 | 2.4 | 3.7 | 2.8 | regulatory; growth/proliferation;growth factor; TGF-beta; | secreted growth factor activity; SMAD; TGFbeta receptor signaling pathway | |
| rc_AA849769_g_at | Follistatin related protein precursor | -1.3 | -1.7 | -2.2 | -1.5 | regulatory; growth/proliferation;growth factor; TGF-beta; | secreted growth factor activity; SMAD; TGFbeta receptor signaling pathway | |
| AF015719_s_at | Interleukin 15 | 3.8 | 1.9 | 1.4 | 1.6 | regulatory; growth/proliferation;proliferation; positive | apoptosis; secreted growth factor activity; cytokine signaling; endosome; JAK-STAT | This cytokine induces the activation of JAK kinases, as well as the phosphorylation and activation of transcription activators STAT3, STAT5, and STAT6. |
| AB000362_at | Cold inducible RNA-binding protein | 2.7 | 3.4 | 2.9 | 2.7 | regulatory; mRNA processing | RNA stability; shock | |
| rc_AA892014_s_at | HLA-B associated transcript 1 (Bat1) | 1.4 | 1.3 | 1.8 | 2.2 | regulatory; mRNA processing | DEAD RNA helicase | |
| rc_AI176621_at | iron-responsive element-binding protein | 2.0 | 2.7 | 2.5 | 1.9 | regulatory; mRNA processing | iron homeostasis; RNA stability | |
| K00512_at | Myelin basic protein | 1.2 | 1.2 | 1.9 | 2.3 | regulatory; PI3k | development; Pi3K; neurogenesis | |
| L19933_s_at | Protein tyrosine phosphatase, receptor type, D | 1.2 | 1.5 | 1.9 | 2.4 | regulatory; proliferation; oncogenesis/tumor supressor; | transmembrane receptor; neurogenesis; differentiation; oncogenesis; adhesion | |
| J03627_at | Annexin II ligand, calpactin I (S100a10) | -1.2 | -1.8 | -2.0 | -2.4 | regulatory; signal transduction | calcium signaling; cell cycle; differentiation | |
| S48813_s_at | Beta-adrenergic receptor kinase | -1.1 | 1.6 | 3.7 | 6.8 | regulatory; signal transduction | stress or injury; GTP signaling | |
| M16112_at | Calcium/calmodulin-dependent protein kinase II beta | 1.8 | -1.5 | -1.5 | -2.8 | regulatory; signal transduction | calcium signaling | |
| S71570_s_at | Calmodulin-dependent protein kinase 2 gamma | 2.0 | 2.1 | 2.0 | 1.7 | regulatory; signal transduction | calcium signaling | |
| X94351_at | CDC-like kinase 3 | 2.3 | 1.9 | 1.6 | 1.5 | regulatory; signal transduction | SR protein localization; mRNA splicing | The prototype, murine Clk1 (mClk1), is a nuclear dual-specificity kinase that can interact with, and cause the nuclear redistribution of, SR proteins. |
| U21101_at | cyclic GMP stimulated phosphodiesterase | 1.3 | 2.9 | 2.4 | 3.1 | regulatory; signal transduction | cAMP regulator; | |
| rc_AA924925_at | ER transmembrane protein Dri 42 | 1.0 | 1.0 | 2.0 | 2.1 | regulatory; signal transduction | ||
| AB016161cds_r_at | gamma-aminobutyric acid (GABA) B receptor, 1 | 1.2 | 1.5 | 2.4 | 1.5 | regulatory; signal transduction | adenylate cyclase activity; gamma-amino butyric acid signaling pathway; synaptic; metabotropic glutamate receptor signaling pathway | |
| M90518_at | Glutamate receptor, metabotropic 4 | -1.4 | -1.6 | -2.3 | -1.0 | regulatory; signal transduction | cAMP responsive; G-protein coupled receptor protein signaling pathway; synaptic transmission; metabotropic glutamate, GABA-B-like receptor activity; negative regulation of adenylate cyclase activity | Group II and III receptors are linked to the inhibition of the cyclic AMP cascade but differ in their agonist selectivities |
| AB007689_at | homer, neuronal immediate early gene 2 | -1.1 | -3.1 | -4.8 | -5.3 | regulatory; signal transduction | metabotropic glutamate receptor signaling pathway; GKAP/Homer scaffold activity | |
| U13396_g_at | Janus kinase 2 (a protein tyrosine kinase) | 2.3 | 3.1 | 2.1 | 1.2 | regulatory; signal transduction | JAK-STAT; cytokine signaling; negative regulation of cell proliferation; differentiation | |
| U97146_at | Lysophospholipase | 1.3 | 2.4 | 1.6 | 1.3 | regulatory; signal transduction | phosopholipase | Lysophospholipases are enzymes that act on biological membranes to regulate the multifunctional lysophospholipids. |
| U48596_g_at | Mitogen activated protein kinase kinase kinase 1; Map3k1 | 2.3 | 1.6 | 1.4 | 1.5 | regulatory; signal transduction | MAPK; MEK; JNK; ERK; p38; apoptosis; cytokine signaling | |
| rc_AI011376_at | Mitogen-activated protein kinase kinase 2, EST (mouse) | 2.3 | 2.6 | 2.8 | 1.7 | regulatory; signal transduction | MAPK; MEK; JNK; ERK; p38; apoptosis; cytokine signaling | |
| rc_AA955477_g_at | Mitogen-activated protein kinase kinase 2, EST (mouse) | 1.4 | 2.3 | 2.3 | 1.9 | regulatory; signal transduction | MAPK; MEK; JNK; ERK; p38; apoptosis; cytokine signaling | |
| rc_AA925300_at | Mitogen-activated protein kinase kinase kinase 3 | 1.2 | 1.1 | 2.1 | 1.1 | regulatory; signal transduction | MAPK; MEK; JNK; ERK; p38; apoptosis; cytokine signaling | |
| rc_AA891864_at | Nuclear ATP/GTP-binding protein, EST (mouse) | 1.4 | 1.9 | 3.5 | 3.4 | regulatory; signal transduction | differnetiation; Purkinje cell degeneration; carboxypeptidase; regeneration | NNA1 is a zinc carboxypeptidase that contains nuclear localization signals and an ATP/GTP-binding motif; Nna1 may contribute to nuclear signaling events in differentiating and regenerating neurons |
| E03344cds_s_at | Peroxisomal membrane protein 3 | 2.1 | 1.8 | 2.2 | 1.5 | regulatory; signal transduction | peroxisome organization and biogenesis | |
| M20637_s_at | Phospholipase C, delta 1 | 1.3 | 2.2 | 2.3 | 2.1 | regulatory; signal transduction | calcium signaling | |
| U16655_at | Phospholipase C, delta 4 | 2.0 | 2.8 | 1.8 | 1.9 | regulatory; signal transduction | calcium signaling | |
| D26180_at | protein kinase C-like 1 | 1.0 | 2.2 | 2.4 | 1.7 | regulatory; signal transduction | activation of JUN kinase | |
| rc_AI012595_at | Protein phosphatase 2 (2A), catalytic subunit, alpha isoform | -2.1 | -2.5 | -1.9 | -1.7 | regulatory; signal transduction | differentiation; insulin | Protein phosphatase 2A (PP2A) acts on a number of enzymes involved in the insulin regulation of glucose uptake and glycogen synthesis |
| X16043cds_at | protein phosphatase 2A catalytic subunit isotype alpha | -1.7 | -2.0 | -1.6 | -1.9 | regulatory; signal transduction | differentiation; insulin | Protein phosphatase 2A (PP2A) acts on a number of enzymes involved in the insulin regulation of glucose uptake and glycogen synthesis |
| S90449_at | protein phosphatase 2C | -1.5 | -1.6 | -1.1 | -2.1 | regulatory; signal transduction | ||
| D01046_at | Rab11b, member RAS oncogene family | 1.4 | 1.4 | 2.7 | 2.0 | regulatory; signal transduction | intracellular trafficking; GTP signaling; Ras | |
| U12187_at | Ras-related associated with diabetes | -5.0 | -2.0 | -2.6 | -2.1 | regulatory; signal transduction | GTP signaling | |
| rc_AA799791_at | serine/threonine kinase 25, ESTs (yeast) | 1.4 | 1.4 | 2.6 | -1.4 | regulatory; signal transduction | cAMP responsive; PKC; oxidative stress | |
| U25281_at | SH3 domain binding protein CR16 | 2.0 | 1.7 | 2.3 | 5.5 | regulatory; signal transduction | SH3; cytoskeletal organization | |
| rc_AI237576_s_at | SPA-1 like protein p1294 | 1.1 | 1.6 | -2.6 | -1.3 | regulatory; signal transduction | cytoskeletal organization; NMDA; GTPase activating | |
| AF065161_at | Suppressor of cytokine signaling (SOCS-1) (Cish1) | 3.0 | 1.3 | 1.9 | 1.6 | regulatory; signal transduction | cytokine signaling; JAK-STAT; MAPK; IGF; apoptosis | The protein encoded by this gene is found to interact with the cytoplasmic domain of insulin-like growth factor-1 receptor (IGF1R), and thus is thought to be involved in the regulation of IGF1R mediated cell signaling |
| AF075382_at | Suppressor of cytokine signaling-2 (SOCS-2) (Cish2) | 2.3 | 7.5 | 1.6 | 1.7 | regulatory; signal transduction | cytokine signaling; JAK-STAT; MAPK; IGF; apoptosis | The protein encoded by this gene is found to interact with the cytoplasmic domain of insulin-like growth factor-1 receptor (IGF1R), and thus is thought to be involved in the regulation of IGF1R mediated cell signaling |
| K01934mRNA#2_at | Thrsp, thyroid hormone responsive SPOT14 homolog (Rattus) | 2.1 | 4.3 | 1.1 | 8.2 | regulatory; signal transduction | possible involvement in human lipid disorders; Identification of genes enhanced by protein-calorie malnutrition | |
| Y13275_at | Transmembrane 4 superfamily member; tetraspanin | 1.1 | 1.2 | 4.5 | 5.1 | regulatory; signal transduction | adhesion | |
| U96490_at | Yip1p-interacting factor | -1.1 | -2.7 | -1.5 | -1.3 | regulatory; signal transduction | GTP signaling; intracellular trafficking | |
| rc_AA891107_at | Diphosphoinositol polyphosphate phosphohydolase t2 | -1.3 | -2.0 | -1.6 | -2.3 | regulatory; signaling | intracellular trafficking | The turnover of the "high energy" diphosphoinositol polyphosphates by Ca(2+)- and cyclic nucleotide-modulated enzymes is considered a regulatory, molecular switching activity. Target processes may include intracellular trafficking. |
| AB007690_s_at | homer, neuronal immediate early gene 2 | -1.4 | -3.2 | -8.6 | -13.7 | regulatory; signaling | metabotropic glutamate receptor signaling pathway; GKAP/Homer scaffold activity | |
| D44495_s_at | apurinic/apyrimidinic endonuclease 1 | 2.1 | 1.9 | 1.4 | 1.3 | regulatory; transcription | cAMP responsive; DNA repair; stress or injury | |
| U04835_at | cAMP responsive element modulator (CREM) | -11.2 | -2.5 | -2.0 | -1.4 | regulatory; transcription | cAMP responsive; translation regulator | |
| S66024_at | cAMP responsive element modulator (CREM) | -8.6 | -6.6 | -1.5 | -2.7 | regulatory; transcription | cAMP responsive; translation regulator | |
| U50736_s_at | Cardiac ankyrin repeat protein (Carp) | -2.5 | -1.7 | -2.5 | -6.7 | regulatory; transcription | cytokine signaling; differentiation; development | |
| rc_AI014091_at | Cbp/p300-interacting transactivator 2; Mrg1 | 2.8 | 2.0 | 2.6 | 1.3 | regulatory; transcription | development; apoptosis; myogenesis | |
| rc_AA900476_g_at | Cbp/p300-interacting transactivator 2; Mrg1 | 1.7 | 1.5 | 2.2 | 1.5 | regulatory; transcription | development; apoptosis; myogenesis | |
| rc_AA900476_at | Cbp/p300-interacting transactivator 2; Mrg1 | 5.2 | 2.2 | 6.6 | 3.4 | regulatory; transcription | development; apoptosis; myogenesis | |
| rc_AI175959_at | c-Jun, EST (human) | 1.3 | 1.7 | 3.1 | 2.2 | regulatory; transcription | apoptosis; SMAD; AP1; NFkB; ferritin | |
| AF055884_s_at | DEAF-1 related transcriptional regulator (NUDR) | -1.5 | 1.3 | 1.8 | 2.2 | regulatory; transcription | ||
| D13417_g_at | Hairy-related and enhancer of split 1 | 1.8 | 2.6 | 2.0 | 1.7 | regulatory; transcription | adhesion; development; Ebox; neurogenesis; Notch signaling; myogenesis | |
| M65251_s_at | Human immunodeficiency virus type I enhancer-binding protein 2 | 1.2 | 1.6 | 2.0 | 2.1 | regulatory; transcription | metal ion binding activity | |
| X96437mRNA_g_at | immediate early response 3 (IEX-3 or Prg1) | 3.4 | 2.1 | 2.2 | 1.1 | regulatory; transcription | apoptosis inhibitor; cAMP responsive | This gene functions in the protection of cells from Fas- or tumor necrosis factor type alpha-induced apoptosis. |
| rc_AA799566_g_at | incisor protein | 1.7 | 6.2 | 3.7 | 3.3 | regulatory; transcription | DNA repair; stress or injury | |
| L23148_g_at | Inhibitor of DNA binding 1, helix-loop-helix protein (splice variation) | -1.6 | -2.9 | -2.1 | -2.6 | regulatory; transcription | SMAD; development; Ebox; myogenesis | |
| D12769_g_at | Kruppel-like factor 9 | 1.5 | 1.9 | 2.2 | 2.3 | regulatory; transcription | JNK | |
| M84176_at | Myogenic regulatory factor D | 3.4 | 3.5 | 5.8 | 3.0 | regulatory; transcription | development; differentiation; myogenesis | |
| X13167cds_s_at | Nuclear Factor IA (Nfia) | 1.6 | 2.2 | 1.4 | -1.1 | regulatory; transcription | translation regulator activity; cytokine signaling; Y-box binding protein | |
| U20796_at | nuclear receptor subfamily 1, group D, member 2 | 1.6 | 2.1 | 1.4 | 1.7 | regulatory; transcription | ligand-dependent nuclear receptor signaling; Rev-ErbA; differentiation; development | In summary, HZF-2 alpha/beta are novel orphan nuclear receptors which may play an important role in hormone-dependent aspects of developmental processes modulating hippocampal and cerebellar plasticity |
| rc_AI176710_at | nuclear receptor subfamily 4, group A, member 3 | -1.6 | -1.3 | -1.4 | -3.1 | regulatory; transcription | ligand-dependent nuclear receptor signaling; steroid hormone receptor activity; NGFI-B | A cDNA clone of NOR-1 encodes a 68kDa, 628 amino acid residue-containing protein, with an amino acid sequence highly homologous to the Nur77 family in its DNA-binding domain and moderately so in its putative ligand-binding domain. Using mobility shift ass |
| U17254_at | Nur77; Immediate early gene transcription factor NGFI-B | -2.4 | -1.4 | 2.4 | 1.4 | regulatory; transcription | ligand-dependent nuclear receptor signaling; NGFI-B | |
| X91988_at | Signal transducer and activator of transcription 5b | 1.6 | 1.6 | 2.6 | 1.5 | regulatory; transcription | cytokine signaling; JAK-STAT | |
| D37934_g_at | Sirtuin 2 (silent mating type information regulation 2, homolog) 2 | 1.1 | 2.8 | 1.5 | 1.3 | regulatory; transcription | chromatin silencing | yeast sirtuin proteins are known to regulate epigenetic gene silencing and suppress recombination of rDNA. Studies suggest that the human sirtuins may function as intracellular regulatory proteins with mono-ADP-ribosyltransferase activity. |
| rc_AA891969_at | Small Unique Nuclear hormone receptor CoRepressor (C1D) | 1.4 | 2.0 | 1.7 | 1.6 | regulatory; transcription | myogenesis; differentiation; ligand-dependent nuclear receptor signaling | We conclude that SUN-CoR is a corepressor and may function as an additional component of the complex involved in transcriptional repression by unliganded and orphan nuclear hormone receptors. |
| U89282_at | Telomerase protein component 1 | 1.4 | 1.8 | 2.1 | 1.6 | regulatory; transcription | chromatin | |
| rc_AI172476_at | TGF-B inducible early growth response | 1.8 | 2.5 | 2.8 | 1.9 | regulatory; transcription | SMAD; TGFbeta receptor signaling pathway | TIEG amplies Smad signaling. |
| L14463_at | Transducin-like enhancer of split 4 (E(sp1) homolog; EST (rat) | 1.4 | 1.3 | 2.4 | 1.3 | regulatory; transcription | development; differentiation; Notch signaling; myogenesis | |
| rc_AA875084_at | Transducin-like enhancer of split 4 (E(sp1) homolog; EST (rat) | 2.4 | 3.0 | 3.6 | 3.2 | regulatory; transcription | development; differentiation; Notch signaling; myogenesis | |
| X59993_at | Putative zinc finger protein | 2.0 | 1.4 | 2.3 | 2.8 | regulatory; transcription factor | ||
| L10326_at | GNAS complex locus | -1.0 | 1.5 | 2.2 | 1.6 | regulatory; vesicle transport | GTP signaling; intracellular trafficking; adenylate cyclase activation | |
| U50927_at | Solute carrier family 30 (zinc transporter), member 2 | 1.1 | 2.0 | 2.7 | 1.1 | regulatory; vesicle transport | endosome; synaptic; zinc binding activity | |
| rc_AI639484_at | Synaptic vesicle glycoprotein 2b | 10.8 | 3.2 | 1.2 | 2.6 | regulatory; vesicle transport | development | |
| rc_AI228548_at | S-100 protein, alpha chain | 1.6 | 1.3 | 1.3 | 2.0 | regulatory;adhesion | calcium signaling; cel cycle; differnetiation; PKC; cytoskeleton | This protein may function in stimulation of Ca2+-induced Ca2+ release, inhibition of microtubule assembly, and inhibition of protein kinase C-mediated phosphorylation. Reduced expression of this protein has been implicated in cardiomyopathies. |
| U49062_at | Antigen CD24 | 3.7 | 5.7 | 11.0 | 13.0 | stress; immune; antigen | ||
| U49062_g_at | Antigen CD24 | 2.5 | 2.8 | 2.7 | 1.8 | stress; immune; antigen | ||
| rc_AA818025_g_at | Antigen CD59 | 1.6 | 2.0 | 2.2 | 2.7 | stress; immune; antigen | ||
| rc_AA818025_at | Antigen CD59 | 1.4 | 1.8 | 1.8 | 2.2 | stress; immune; antigen | ||
| D26439_at | CD1D antigen | 2.0 | 1.7 | 1.3 | 1.3 | stress; immune; antigen | ||
| X13044_at | CD74 antigen (invariant polpypeptide of major histocompatibility class II antigen-associated) | 1.0 | 1.3 | 2.3 | 1.3 | stress; immune; antigen | ||
| X53054_at | Class II MHC RT1.D(n) beta chain precursor | 1.0 | 1.2 | 10.8 | 4.2 | stress; immune; antigen | ||
| X53054_g_at | Class II MHC RT1.D(n) beta chain precursor | -1.1 | 1.1 | 2.4 | 1.3 | stress; immune; antigen | ||
| X14323cds_g_at | Fc receptor, IgG, alpha chain transporter | 1.7 | 2.2 | 2.4 | 2.3 | stress; immune; antigen | ||
| X14254cds_at | MHC class II-associated invariant chain | 2.5 | 2.6 | 9.3 | 7.1 | stress; immune; antigen | ||
| X14254cds_g_at | MHC class II-associated invariant chain | 1.1 | 1.5 | 5.4 | 2.6 | stress; immune; antigen | ||
| X96394_at | ATP-binding cassette, sub-family C ( CFTR/MRP), member 1a | 5.4 | 2.6 | 3.3 | 3.1 | stress; oxidative/toxic | ||
| X13044_g_at | CD74 antigen (invariant polpypeptide of major histocompatibility class II antigen-associated) | -1.1 | 1.3 | 2.1 | 1.6 | stress; oxidative/toxic | ||
| rc_AA817854_s_at | Ceruloplasmin (ferroxidase) | 1.1 | 1.4 | 3.7 | 2.7 | stress; oxidative/toxic | ||
| L33869_at | Ceruloplasmin (ferroxidase) | -1.4 | 1.3 | 2.0 | 2.5 | stress; oxidative/toxic | ||
| X07365_s_at | Glutathione peroxidase 1 | -1.4 | -4.0 | -3.9 | -2.0 | stress; oxidative/toxic | ||
| X12367cds_s_at | Glutathione peroxidase 1 | -1.3 | -3.0 | -3.5 | -1.9 | stress; oxidative/toxic | ||
| D00680_at | glutathione peroxidase precursor, plasma | 1.2 | 1.6 | 1.9 | 2.2 | stress; oxidative/toxic | ||
| E01415cds_s_at | Glutathione-S-transferase | 1.3 | 2.6 | 1.9 | 1.5 | stress; oxidative/toxic | ||
| rc_AA892234_at | Glutathione-S-transferase 3, EST (human) | -1.1 | -2.0 | -3.8 | -2.3 | stress; oxidative/toxic | ||
| U86635_at | Glutathione-S-transferase mu 5 | 1.6 | 2.7 | 3.0 | 2.8 | stress; oxidative/toxic | ||
| U86635_g_at | Glutathione-S-transferase mu 5 | 1.7 | 2.3 | 2.7 | 2.6 | stress; oxidative/toxic | ||
| K01932_f_at | Glutathione-S-transferase, alpha type (Ya) | 1.7 | 4.4 | 3.4 | 2.0 | stress; oxidative/toxic | ||
| X78848cds_f_at | Glutathione-S-transferase, alpha type (Ya) | 2.0 | 2.7 | 3.7 | 2.5 | stress; oxidative/toxic | ||
| S72505_f_at | Glutathione-S-transferase, alpha type (Ya) | 3.2 | 6.2 | 6.6 | 2.9 | stress; oxidative/toxic | ||
| J03914cds_s_at | glutathione-S-transferase, mu type 2 (Yb2) | 1.5 | 3.2 | 5.3 | 5.6 | stress; oxidative/toxic | ||
| X04229cds_s_at | glutathione-S-transferase, mu type 2 (Yb2) | 1.7 | 2.7 | 2.9 | 2.1 | stress; oxidative/toxic | ||
| J02592_s_at | glutathione-S-transferase, mu type 2 (Yb2) | -1.1 | 3.1 | 3.5 | 6.6 | stress; oxidative/toxic | ||
| H32189_s_at | glutathione-S-transferase, mu type 2 (Yb2) | 1.0 | 2.0 | 2.2 | 1.9 | stress; oxidative/toxic | ||
| D50564_at | Mercaptopyruvate sulfurtransferase | 1.5 | 2.5 | 2.3 | 1.9 | stress; oxidative/toxic | ||
| U23769_at | PDZ and LIM domain 1 (elfin) | -1.9 | -3.1 | -4.9 | -3.0 | stress; oxidative/toxic | ||
| rc_AI230247_s_at | Selenoprotein P, plasma, 1 | 1.4 | 2.2 | 1.5 | 1.4 | stress; oxidative/toxic | ||
| rc_AI014169_at | Thioredoxin interacting factor; Vdup1 upregulated by 1,25-dihydroxyvitamin D-3 | 1.6 | 2.4 | 1.7 | 1.5 | stress; oxidative/toxic | ||
| rc_AI237654_at | Thioredoxin interacting factor; Vdup1 upregulated by 1,25-dihydroxyvitamin D-3 | 1.6 | 2.1 | 2.2 | 1.8 | stress; oxidative/toxic | ||
| X56228_at | Thiosulfate sulphurtransferase (rhodanese) | 1.5 | 2.0 | 3.2 | 2.0 | stress; oxidative/toxic | ||
| X56228_g_at | Thiosulfate sulphurtransferase (rhodanese) | 4.3 | 6.9 | 7.4 | 3.4 | stress; oxidative/toxic | ||
| M58040_at | Transferrin receptor | 3.0 | -1.7 | -1.8 | -1.7 | stress; oxidative/toxic | ||
| X07551cds_s_at | Ests | 1.1 | 1.5 | 2.0 | 1.9 | uknown | ||
| rc_AA859581_at | Late gestation lung protein | -1.1 | -2.2 | -1.6 | -1.2 | uknown | morphogenesis | |
| AB000199_at | CCA2 protein | -1.8 | -2.1 | -2.7 | -2.6 | unknown | ||
| rc_AA860015_at | cDNA clone 617608 | -1.2 | -2.1 | -1.1 | -1.1 | unknown | ||
| rc_AA858588_g_at | cDNA clone 864365 | 1.6 | 2.0 | 2.5 | 1.6 | unknown | ||
| rc_AI639510_at | EST, clone rx02430, 3'end | 1.2 | 1.7 | 1.4 | 2.2 | unknown | ||
| rc_AA800168_at | EST, clone UI-R-C2p-rd-d-02-0-UI, 3'end | 1.1 | 1.2 | 2.1 | 1.3 | unknown | ||
| rc_AA800216_at | EST189713 | -1.3 | -2.2 | -2.7 | -1.6 | unknown | ||
| rc_AA800750_f_at | EST190247 | 1.0 | -1.5 | -2.1 | -2.7 | unknown | ||
| rc_AA893871_at | EST197674 Normalized rat placenta, Bento ESTs, Soares Rattus sp. cDNA clone RPLAM87 3' end, MRNA sequence | 1.2 | -1.1 | 1.6 | 2.1 | unknown | ||
| rc_AA800218_at | ESTs | 2.6 | 2.3 | 2.4 | 1.7 | unknown | ||
| rc_AA799971_g_at | ESTs | 1.1 | 1.4 | 1.9 | 2.0 | unknown | ||
| rc_AA892897_at | ESTs | 1.1 | -1.4 | -1.1 | -2.5 | unknown | ||
| rc_AA799971_at | ESTs | 1.1 | 1.2 | 1.4 | 2.1 | unknown | ||
| rc_AA799964_at | ESTs | 1.4 | 1.7 | 2.0 | 1.5 | unknown | ||
| rc_AA866259_at | Ests | 2.3 | 1.1 | 1.3 | 1.3 | unknown | ||
| rc_AI639170_at | ESTs | 2.2 | 1.1 | 1.8 | 2.1 | unknown | ||
| rc_AI639238_at | ESTs | 1.9 | 1.9 | 2.2 | 1.9 | unknown | ||
| rc_AI639499_s_at | ESTs | 1.4 | 2.4 | 2.9 | 2.0 | unknown | ||
| rc_AA799762_g_at | ESTs | 1.6 | 1.1 | 2.2 | 1.2 | unknown | ||
| rc_AA800197_at | ESTs | 1.3 | 1.6 | 2.6 | 1.0 | unknown | ||
| rc_AA891054_at | ESTs | 1.3 | 2.2 | 2.5 | 3.1 | unknown | ||
| rc_AA893208_at | ESTs | 2.3 | -1.1 | 1.5 | 1.1 | unknown | ||
| rc_AI639294_at | ESTs | 1.1 | 2.1 | 2.1 | 1.2 | unknown | ||
| rc_AA892280_at | ESTs | 2.8 | 2.1 | 2.4 | 1.6 | unknown | ||
| rc_AA875390_at | ESTs | -3.4 | 6.4 | 4.0 | -2.2 | unknown | ||
| rc_AA892549_at | ESTs | 2.3 | 1.1 | 1.9 | 3.1 | unknown | ||
| rc_AA859536_at | ESTs | -1.1 | -1.6 | -1.5 | -2.2 | unknown | ||
| rc_AI231778_at | ESTs | 2.6 | 1.8 | 1.8 | 1.8 | unknown | ||
| rc_AA799467_at | ESTs | 1.8 | 2.3 | 1.9 | 1.8 | unknown | ||
| rc_AA892353_at | Ests | -1.3 | 1.7 | 2.2 | 1.6 | unknown | ||
| rc_AA799457_at | ESTs | -1.7 | -2.1 | -2.1 | -2.1 | unknown | ||
| rc_AA799570_at | ESTs | -1.2 | -2.0 | -2.5 | -2.1 | unknown | ||
| rc_AI236601_at | ESTs | -1.3 | -2.0 | -1.8 | -2.4 | unknown | ||
| rc_AA893280_at | ESTs | -1.0 | -1.5 | -2.0 | -2.4 | unknown | ||
| rc_AA894304_at | ESTs | 1.4 | 1.7 | 1.9 | 2.5 | unknown | ||
| rc_AI639035_at | ESTs | 3.2 | 1.3 | 1.1 | 2.4 | unknown | ||
| rc_AA894092_at | ESTs | 1.1 | -2.5 | -3.6 | -5.8 | unknown | ||
| rc_AA799666_g_at | ESTs | -1.0 | -2.3 | -2.0 | -1.7 | unknown | ||
| rc_AI639163_at | ESTs | -1.4 | -1.5 | -1.7 | -2.3 | unknown | ||
| rc_H31964_at | ESTs | 1.4 | 1.1 | 1.2 | 2.0 | unknown | ||
| rc_AA892500_at | ESTs | 1.3 | 1.6 | 2.6 | 1.7 | unknown | ||
| rc_AA875132_at | ESTs | -1.1 | 1.7 | 3.1 | 6.8 | unknown | ||
| rc_AI233365_at | ESTs | 2.0 | 1.4 | 1.7 | 1.8 | unknown | ||
| rc_AA875032_at | ESTs | 1.3 | 1.8 | 2.1 | 1.1 | unknown | ||
| rc_AA891818_at | ESTs | -1.4 | -2.1 | -1.8 | -2.1 | unknown | ||
| rc_AA892531_at | ESTs | 1.2 | 1.4 | 2.1 | 2.0 | unknown | ||
| rc_AA858607_at | ESTs | 1.5 | 1.4 | 2.6 | 2.1 | unknown | ||
| rc_AA893043_at | ESTs | 1.0 | -1.4 | -1.5 | -2.6 | unknown | ||
| rc_AA892325_at | ESTs, Highly similar to choline/ethanolaminephosphotransferase [Homo sapiens] [H.sapiens] | 1.6 | -1.0 | 4.0 | 1.4 | unknown | ||
| rc_AI639088_s_at | ESTs, similar to RNA imprinted and accumulated in nucleus (mouse) | -1.3 | -4.1 | -3.1 | -3.0 | unknown | ||
| rc_AA818726_at | ESTs, Weakly similar to CYPM_RAT Peptidyl-prolyl cis-trans isomerase, mitochondrial precursor (PPIase) (Rotamase) (Cyclophilin F) [R.norvegicus] | 1.3 | 2.2 | 1.6 | 1.6 | unknown | ||
| rc_AA800808_at | ESTs, Weakly similar to S12207 hypothetical protein (B2 element) - mouse [M.musculus] | 1.7 | 2.4 | 1.4 | -1.7 | unknown | ||
| AF095741_g_at | Mg87 protein | 1.4 | 2.0 | 1.6 | 1.8 | unknown | ||
| rc_AA892400_at | mitochondrial CCA-adding tRNA-nucleotidyltransferase, ESTs (human) | 1.9 | 2.2 | 3.3 | 2.1 | unknown | ||
| X90642mRNA_at | Multidrug resistance protein (ID:1) | 4.5 | 5.2 | 3.7 | 5.6 | unknown | ||
| X62951mRNA_s_at | pBUS19 with repetitive elements | 1.6 | 2.5 | 1.9 | 1.8 | unknown | ||
| rc_AA891842_at | Podocalyxin precursor | 1.9 | 1.2 | 1.1 | 3.6 | unknown | ||
| M10934_s_at | Retinol-binding protein (RBP) | 1.7 | 1.8 | 1.1 | 2.2 | unknown | carrier protein involved in the transport of retinol (vitamin A alcohol) from the liver storage site to peripheral tissue. Vitamin A is a fat-soluble vitamin necessary for growth, reproduction, differentiation of epithelial tissues, and vision | |
| D89730_at | T16 | 1.7 | 2.2 | 1.8 | 1.9 | unknown | ||
| rc_AA799641_g_at | tumor differentially expressed 1, ESTs (mouse) | 1.4 | 1.7 | 1.1 | 2.5 | unknown | ||
| X84997mRNA#5_at | Variable coding sequence A1 | -2.0 | -5.9 | -1.5 | -2.5 | unknown |