People
Primary Faculty
Simon Kasif Ph.D.
Professor, Biomedical Engineering
Center for Advanced Genomic Technology
Computational Genomics Laboratory
M.S. & PhD, Computer Science, University of Maryland
B.Sc., Mathematics, Tel Aviv University
CV: Link to Curriculum Vitae (pdf)
phone: (617) 358-1845
fax: (617) 353-6766
email: kasif@bu.edu
office: LSEB 902
Research Interests
- Computational Biology
- Computational Functional and Comparative Genomics
- Biotechnology
- Algorithm Design
- Bioinformatics
- Computer Aided Biology
Selected Recent Publications
Faith JJ, Hayete B, Thaden JT, Mogno I, Wierzbowski J, Cottarel G, Kasif S, Collins JJ, Gardner TS "Large-scale Mapping and Validation of Escherichia coli Transcriptional Regulation from a Compendium of Expression Profiles" PLoS Biology : (2007)
Zhang L, Kasif S, Cantor AC "Quantifying DNA-protein Binding Specificities by Using Oligonucleotide Mass Tags and Mass Spectroscopy" Proceedings of the National Academy of Sciences of the United States of America : (2007)
Nariai N, Kolaczyk ED, Kasif S "Probabilistic Protein Function Prediction From Heterogeneous Genome-wide Data" PLoS One : (2007)
Liu M, Liberzon A, Kong SW, Lai WR, Park PJ, Kohane IS, Kasif S "Network-Based Analysis of Affected Biological Processes in Type 2 Diabetes Models" PLoS Genetics : (2007)
Tullai JW, Schaffer ME, Mullenbrock S, Sholder G, Kasif S, Cooper GM "Immediate-early and delayed primary response genes are distinct in function and genomic architecture" Journal of Biological Chemistry : (2007)
Murali TM, Wu CJ, Kasif S "The Art of Gene Function Prediction" Nature Biotechnology : (2006)
