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Division of Graduate Medical Sciences Bulletin

Department of Pathology and Laboratory Medicine

Curriculum and Requirements for the PhD Degree
Courses
Faculty
Graduate School Course Requirements for PhD and MD/PhD Students

Chairman Leonard S. Gottlieb
Associate Chairman and Director of Graduate Studies Adrianne E. Rogers

Programs of Study

The Department of Pathology and Laboratory Medicine offers a doctoral program in pathology that includes experimental pathology, and two interdepartmental tracks (immunology and cell molecular biology). In addition, a neurosciences track is being developed. The doctoral program is broadly based, offers research training in both clinical and basic investigations of disease and encourages students to integrate the two areas where appropriate in their doctoral research. Integration of basic research principles with knowledge of pathophysiology in humans and laboratory animals is a major goal of the training program. The integration is achieved by the close affiliation with Boston Medical Center Hospital pathology which is in the same department and with other clinical departments.

Understanding the predisposing factors and pathological processes leading to disease, at the molecular, cellular, organ, and whole body levels, should ultimately lead to better strategies for prevention and therapy of disease. For example, areas of great interest in current research are the mechanisms that underlie the development of cancer and degenerative diseases, the workings of the immune system in defense against disease, and the genetic bases of many diseases.

The research interests of the faculty include the following: mechanisms of chemical carcinogenesis and mutagenesis and of tumor cell responses to drugs; molecular and cellular immunology, including structure-function analysis and engineering of model and therapeutic antibodies and T cell receptors, characterization and study of factors that determine lymphocyte migration and activity and immunotoxicology; human somatic cell, molecular and cancer genetics; cancers of the breast and the gastrointestinal tract; nutritional effects on toxicity and carcinogenicity of chemicals; mechanisms of cell signalling; roles of growth factors and extracellular matrix in growth and differentiation of tissues; neurochemistry; pathogenesis of atherosclerotic vascular disease. Several faculty members participate actively in the Program in Research on Women's Health. Methods of investigation, in addition to morphologic procedures used in classical pathology and ultrastructural studies, include culture and study of bacterial and mammalian cells and tissues; biochemical and molecular analyses of cell constituents; recombinant DNA technologies; immunological manipulation of cells and animals; immunological and other methods for identification of cell components and of genetic and other biological markers.


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Curriculum and Requirements for the PhD Degree

The curriculum comprises study in formal courses and laboratory experience extending over one to two years, followed by a comprehensive written and oral qualifying examination, taken within one semester after completion of required coursework. Within the following year a proposal for dissertation research is prepared and presented to the student's individual dissertation committee. The research is then performed under the guidance of the major advisor with the help and advice of the committee over the ensuing two or more years. Ultimately the student writes and defends a dissertation based upon the research performed.

The required courses are listed in the table below. The track chosen (pathology or interdepartmental, pathology-immunology is shown as an example) and the degree program (PhD or MD/PhD) determine the specific curriculum. For information on the cell and molecular biology track, please refer to the section "Doctor of Philosophy Program in Cell and Molecular Biology". Laboratory rotations are performed as early as possible in the course of studies to: (1) acquaint the students with research opportunities in the program; (2) teach a variety of approaches to research; (3) teach specific research methods; and (4) permit choice of an area for dissertation research. Rotations can be taken in the summer before beginning formal coursework, during the first year of study, or the following summer. The dissertation research advisor should be chosen and preliminary work in the area of research begun early in the second year of study.


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Courses

GMS PA 500 Introduction to Pathology and Pathophysiology of Disease
Lectures and discussion sessions presenting the basic morphologic and functional changes of major disease processes: cell injury and death, inflammation, cell and tissue response to microbial organisms, atherosclerosis, cancer, etc. Pathology faculty. 4 cr, 2nd sem.

GMS PA 510 Medical Immunology
Prereq: Biochemistry. Basic principles of immunology, with emphasis on their medical relevance, presented through lectures and independent reading followed by a discussion session. The lectures and the major examination coincide with those offered to the first-year medical students. Sharon. 2 cr, 2nd sem.

GMS PA 700 Basic and Experimental Pathology
Prereq: GMS BI 755, 756 or equivalent, and status of PhD candidate or higher. Basic principles of pathology and immunology are presented through lectures, laboratory sessions and computer-assisted instruction. Related research articles and basic histology are discussed in small group sessions that complement the lectures. Note: The immunology requirement is satisfied before registration by the medical immunology course (GMS PA 510) or an equivalency examination offered by the instructor, or MED ME 513. Sharon. 6 cr, 1st sem.

GMS PA 701 Advanced Immunology--Molecular Aspects
Prereq: GMS BI 755,756 or equivalent. An examination of molecules of immunological interest through discussion of research articles and occasional lectures. Topics include gene structure, control of gene expression, and the structure-function relationship of these molecules. Emphasis is placed on the use of recombinant DNA and immunological methods. Offered alternate years. Sharon. 2 cr, 2nd sem.

GMS PA 703 Host Defenses in Pathogenesis: Infectious Disease and Neoplasia
Prereq: microbiology, GMS MI 511, or equivalent, and consent of instructor. Host defense mechanisms in infectious diseases and neoplasia and basic chemotherapeutic approaches to these diseases are considered in lectures and class discussions. The role of nutrition in both pathogenesis of and protection against these disease is presented. Broitman. 2 cr, 2nd sem.

GMS PA 800 Pathology Seminar
Weekly research seminar presented by faculty, students, and guests. Blusztajn, Murnane. 2 cr, 1st & 2nd sem.

GMS PA 801 Special Topics in Pathology
Detailed examination of one specific area of research each term, presented in readings, discussions, and lectures. Presents significant background information, current knowledge, research approaches, and laboratory methodology in each area. Pathology faculty. 2 cr, 1st & 2nd sem.

DIRECTED STUDY or RESEARCH

GMS PA 900 Laboratory Rotations in Pathology

GMS PA 901 Research in Pathology


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Faculty

Charles F. Arkin MD, Professor

Jan K. Blusztajn PhD, Associate Professor

Steven A. Bogen MD, PhD, Assistant Professor

Nancy L. R. Bucher MD, Research Professor

Bohdana F. Burke MD, Assistant Professor

Thomas Christensen PhD, Associate Professor

Leonard S. Gottlieb MD, Professor

John Hayes MD, PhD, Professor

David M. Larson PhD, Associate Professor

Richard Mandel PhD, Associate Professor

Mary J. Murnane PhD, Associate Professor

Michael J. O'Brien MD, Professor

Adrianne E. Rogers MD, Professor

Hugues J.-P. Ryser MD, Professor

Jacqueline Sharon PhD, Professor

Sania Shuja MD, PhD, Assistant Professor

Barbara E. Slack PhD, Assistant Professor

Joint Faculty

David I. Beller PhD, Associate Research Professor (Medicine)

Selwyn A. Broitman PhD, Professor (Microbiology)

Iih-Nan (George) Chou PhD, Professor (Microbiology)

Douglas V. Faller MD, PhD, Professor (Medicine)

Matthew Fenton PhD, Associate Professor (Medicine)

Patricia L. Foster PhD, Professor of Public Health (Environmental Health)

Thomas F. Freddo PhD, Professor (Ophthalmology)

Kevan L. Hartshorn MD, Associate Professor (Medicine)

Shyr-Te Ju PhD, Research Professor (Medicine)

Thomas L. Kemper MD, Professor (Neurology)

Hardy Kornfeld MD, Associate Professor (Medicine)

Neil Kowall MD, Professor (Neurology)

Herbert Z. Kupchik PhD, Professor (Microbiology)

Adam Lerner MD, PhD, Assistant Professor (Medicine)

Ann Marshak-Rothstein PhD, Professor (Microbiology)

Aubrey Milunsky MD, Professor (Pediatrics)

Carol Rosenberg MD, Assistant Professor (Medicine)

David J. Salant MD, Professor (Medicine)

David H. Sherr PhD, Professor (Environmental Health)

Alfred I. Tauber MD, Professor (Medicine)

Michael T. Watkins MD, Associate Professor (Surgery)

Daniel G. Wright MD, Professor (Medicine)


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Graduate School Course Requirements for PhD and MD/PhD Students

Biochemistry (6 credits)

PhD Students
Pathology Track -- required
(GMS 751 is required, although BI 555 and 556 (Biochemistry A and B, 4 credits each) can be substituted with permission.)
Pathology-Immunology Track -- required

MD/PhD Students
Pathology & Pathology-Immunology Tracks
fulfilled by medical school courses

Basic and Experimental Pathology (6 credits)

PhD Students
Pathology Track & Pathology-Immunology Tracks -- required

MD/PhD Students
Pathology & Pathology-Immunology Tracks
fulfilled by medical school courses

Biostatistics: Introduction to Statistical Computing or Intermediate Biostatistics (4 credits)

PhD Students
Pathology & Pathology-Immunology Tracks -- required

MD/PhD Students
Pathology & Pathology-Immunology Tracks -- required

Special Topics/Pathology (4 credits)

PhD Students
Pathology & Pathology-Immunology Tracks -- required

MD/PhD Students
Pathology & Pathology-Immunology Tracks -- required
(The Special Topics course is required in three of the first four semesters in the conventional track and for one semester in the immunology track.)

Medical Immunology (2 credits)

PhD Students
Pathology Track -- required

Basic Immunology (4 credits)

PhD Students
Pathology-Immunology Track required

MD/PhD Students
Pathology & Pathology-Immunology Tracks -- fulfilled by medical school courses

Advanced Immunology: Molecular Aspects (2 credits)

PhD Students
Pathology Track -- elective
Pathology-Immunology Track -- required

MD/PhD Students
Pathology Track -- elective
Pathology-Immunology Track -- required

Advanced Immunology: Cellular Aspects (2 credits)

PhD Students
Pathology-Immunology Track -- required

MD/PhD Students
Pathology-Immunology Track -- required

Pathology Seminar (2 credits)

PhD Students
Pathology & Pathology-Immunology Tracks -- required

MD/PhD Students
Pathology & Pathology-Immunology Tracks -- required
(Attendance at departmental seminars is required through all terms of study and research.)

Pathology Laboratory Rotations (2 credits per rotation)

PhD Students
Pathology & Pathology-Immunology Tracks -- required

MD/PhD Students
Pathology & Pathology-Immunology Tracks -- required
(Three rotations for PhD students and two rotations for MD/PhD students.)

Pathology Research (credits variable)

PhD Students
Pathology & Pathology-Immunology Tracks -- required

MD/PhD Students
Pathology & Pathology-Immunology Tracks -- required

Seminars in Ethics in Biomedical Research

PhD Students
Pathology & Pathology-Immunology Tracks -- required

MD/PhD Students
Pathology & Pathology-Immunology Tracks -- required
(Presented by the Medical Center and the Division of Graduate Medical Sciences.)

Human Genetics (4 credits)

PhD Students
Pathology Track -- elective

MD/PhD Students
Pathology Track -- elective

Cell Biology (4 credits)

PhD Students
Pathology & Pathology-Immunology Tracks -- elective

MD/PhD Students
Pathology & Pathology-Immunology Tracks -- elective

Nucleic Acids (4 credits)

PhD Students
Pathology & Pathology-Immunology Tracks -- elective

MD/PhD Students
Pathology & Pathology-Immunology Tracks -- elective

Pathobiochemistry (2 credits)

PhD Students
Pathology Track -- elective

MD/PhD Students
Pathology Track elective

Special Topics/Biochemistry (2 credits)

PhD Students
Pathology-Immunology Track -- elective

MD/PhD Students
Pathology-Immunology Track -- elective

Growth Control and Cell Transformation (4 credits)

PhD Students
Pathology-Immunology Track -- elective

MD/PhD Students
Pathology-Immunology Track -- elective

Advanced Virology (4 credits)

PhD Students
Pathology-Immunology Track -- elective

MD/PhD Students
Pathology-Immunology Track -- elective

Genetics of Microorganisms (4 credits)

PhD Students
Pathology-Immunology Track -- elective

MD/PhD Students
Pathology-Immunology Track -- elective

Cellular Physiology (2 credits)

PhD Students
Pathology-Immunology Track -- elective

MD/PhD Students
Pathology-Immunology Track -- elective

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11 March 1999
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