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Monday, March 7, 2005
Venue - Boston University, College of Engineering, 44 Cummington Street, Room ERB 203. (MAP - #26)
| Time |
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| 8:30 AM - 8:45 AM
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Welcome and General Introduction - Genes and Proteins Overview
Instructor - Charles Delisi, Boston University
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| 8:45 AM - 9:30 AM |
Basic Bioinformatics - Alignment Tools Available on NCBI
Instructor - Franco Preparata, Brown University
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| 9:30 AM - 10:15 AM |
Immunology - Basic Immune System Components: T Cells, B Cells and Antibodies, NK cells, Cytokines, and What Can Be and Can't Be Modelled.
Instructor - Anne De Groot, Brown University
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| 10:15 AM - 10:30 AM
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Break
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| 10:30 AM - 11:10 AM
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Immunological Databases
Instructor - Darren Flower, Jenner Institute for Vaccine Research
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| 11:10 AM - 11:50 AM
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Predictive Systems in Immunology - Proteasome, TAP, MHC binding Class I & Class II, and Balb C.
Instructor - Vladimir Brusic, Institute for Infocomm Research
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| 11:50 AM - 12:30 PM
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Allergen Resources and Assessment of Allergenicity
Instructors- Steven Gendel, US FDA and Vladimir Brusic, Institute for Infocomm Research
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| 1:30 PM - 6:00 PM
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Example/Tutorial - Two Case Studies
Speaker - Bill Martin and Anne De Groot (Brown University)
Case Study 1 -
- Epitope discovery in Infectious Disease and HIV
- Conservatrix
- EpiMatrix Class Class II
- Epitope assembly Clustimer
- Immunogenic consensus sequences
- Epiassembler
- Blastimer
- VaccineCAD
Case Study 2 -
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